import networkx as nx class DirectedGraph(nx.DiGraph): """ Base class for all directed graphical models. """ def __init__(self, edges, node_labels): """ Input: edges: an edge list, e.g. [(parent1, child1), (parent1, child2)] node_labels: a list of strings of node labels """ super().__init__() if edges is not None: self.add_edges_from(edges) if node_labels is not None: self.add_nodes_from(node_labels) def get_leaves(self): """ Returns a list of leaves of the graph. """ return [node for node, out_degree in self.out_degree_iter() if out_degree == 0] def get_roots(self): """ Returns a list of roots of the graph. """ return [node for node, in_degree in self.in_degree().items() if in_degree == 0] def get_topologically_sorted_nodes(self, reverse=False): return nx.topological_sort(self, reverse=reverse)