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/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.spark.rdd
import java.io.{IOException, ObjectOutputStream}
import scala.collection.mutable.ArrayBuffer
import scala.language.existentials
import scala.reflect.ClassTag
import org.apache.spark._
import org.apache.spark.annotation.DeveloperApi
import org.apache.spark.serializer.Serializer
import org.apache.spark.util.collection.{CompactBuffer, ExternalAppendOnlyMap}
import org.apache.spark.util.Utils
/**
* The references to rdd and splitIndex are transient because redundant information is stored
* in the CoGroupedRDD object. Because CoGroupedRDD is serialized separately from
* CoGroupPartition, if rdd and splitIndex aren't transient, they'll be included twice in the
* task closure.
*/
private[spark] case class NarrowCoGroupSplitDep(
@transient rdd: RDD[_],
@transient splitIndex: Int,
var split: Partition
) extends Serializable {
@throws(classOf[IOException])
private def writeObject(oos: ObjectOutputStream): Unit = Utils.tryOrIOException {
// Update the reference to parent split at the time of task serialization
split = rdd.partitions(splitIndex)
oos.defaultWriteObject()
}
}
/**
* Stores information about the narrow dependencies used by a CoGroupedRdd.
*
* @param narrowDeps maps to the dependencies variable in the parent RDD: for each one to one
* dependency in dependencies, narrowDeps has a NarrowCoGroupSplitDep (describing
* the partition for that dependency) at the corresponding index. The size of
* narrowDeps should always be equal to the number of parents.
*/
private[spark] class CoGroupPartition(
idx: Int, val narrowDeps: Array[Option[NarrowCoGroupSplitDep]])
extends Partition with Serializable {
override val index: Int = idx
override def hashCode(): Int = idx
}
/**
* :: DeveloperApi ::
* A RDD that cogroups its parents. For each key k in parent RDDs, the resulting RDD contains a
* tuple with the list of values for that key.
*
* Note: This is an internal API. We recommend users use RDD.cogroup(...) instead of
* instantiating this directly.
*
* @param rdds parent RDDs.
* @param part partitioner used to partition the shuffle output
*/
@DeveloperApi
class CoGroupedRDD[K: ClassTag](
@transient var rdds: Seq[RDD[_ <: Product2[K, _]]],
part: Partitioner)
extends RDD[(K, Array[Iterable[_]])](rdds.head.context, Nil) {
// For example, `(k, a) cogroup (k, b)` produces k -> Array(ArrayBuffer as, ArrayBuffer bs).
// Each ArrayBuffer is represented as a CoGroup, and the resulting Array as a CoGroupCombiner.
// CoGroupValue is the intermediate state of each value before being merged in compute.
private type CoGroup = CompactBuffer[Any]
private type CoGroupValue = (Any, Int) // Int is dependency number
private type CoGroupCombiner = Array[CoGroup]
private var serializer: Serializer = SparkEnv.get.serializer
/** Set a serializer for this RDD's shuffle, or null to use the default (spark.serializer) */
def setSerializer(serializer: Serializer): CoGroupedRDD[K] = {
this.serializer = serializer
this
}
override def getDependencies: Seq[Dependency[_]] = {
rdds.map { rdd: RDD[_] =>
if (rdd.partitioner == Some(part)) {
logDebug("Adding one-to-one dependency with " + rdd)
new OneToOneDependency(rdd)
} else {
logDebug("Adding shuffle dependency with " + rdd)
new ShuffleDependency[K, Any, CoGroupCombiner](
rdd.asInstanceOf[RDD[_ <: Product2[K, _]]], part, serializer)
}
}
}
override def getPartitions: Array[Partition] = {
val array = new Array[Partition](part.numPartitions)
for (i <- 0 until array.length) {
// Each CoGroupPartition will have a dependency per contributing RDD
array(i) = new CoGroupPartition(i, rdds.zipWithIndex.map { case (rdd, j) =>
// Assume each RDD contributed a single dependency, and get it
dependencies(j) match {
case s: ShuffleDependency[_, _, _] =>
None
case _ =>
Some(new NarrowCoGroupSplitDep(rdd, i, rdd.partitions(i)))
}
}.toArray)
}
array
}
override val partitioner: Some[Partitioner] = Some(part)
override def compute(s: Partition, context: TaskContext): Iterator[(K, Array[Iterable[_]])] = {
val split = s.asInstanceOf[CoGroupPartition]
val numRdds = dependencies.length
// A list of (rdd iterator, dependency number) pairs
val rddIterators = new ArrayBuffer[(Iterator[Product2[K, Any]], Int)]
for ((dep, depNum) <- dependencies.zipWithIndex) dep match {
case oneToOneDependency: OneToOneDependency[Product2[K, Any]] @unchecked =>
val dependencyPartition = split.narrowDeps(depNum).get.split
// Read them from the parent
val it = oneToOneDependency.rdd.iterator(dependencyPartition, context)
rddIterators += ((it, depNum))
case shuffleDependency: ShuffleDependency[_, _, _] =>
// Read map outputs of shuffle
val it = SparkEnv.get.shuffleManager
.getReader(shuffleDependency.shuffleHandle, split.index, split.index + 1, context)
.read()
rddIterators += ((it, depNum))
}
val map = createExternalMap(numRdds)
for ((it, depNum) <- rddIterators) {
map.insertAll(it.map(pair => (pair._1, new CoGroupValue(pair._2, depNum))))
}
context.taskMetrics().incMemoryBytesSpilled(map.memoryBytesSpilled)
context.taskMetrics().incDiskBytesSpilled(map.diskBytesSpilled)
context.taskMetrics().incPeakExecutionMemory(map.peakMemoryUsedBytes)
new InterruptibleIterator(context,
map.iterator.asInstanceOf[Iterator[(K, Array[Iterable[_]])]])
}
private def createExternalMap(numRdds: Int)
: ExternalAppendOnlyMap[K, CoGroupValue, CoGroupCombiner] = {
val createCombiner: (CoGroupValue => CoGroupCombiner) = value => {
val newCombiner = Array.fill(numRdds)(new CoGroup)
newCombiner(value._2) += value._1
newCombiner
}
val mergeValue: (CoGroupCombiner, CoGroupValue) => CoGroupCombiner =
(combiner, value) => {
combiner(value._2) += value._1
combiner
}
val mergeCombiners: (CoGroupCombiner, CoGroupCombiner) => CoGroupCombiner =
(combiner1, combiner2) => {
var depNum = 0
while (depNum < numRdds) {
combiner1(depNum) ++= combiner2(depNum)
depNum += 1
}
combiner1
}
new ExternalAppendOnlyMap[K, CoGroupValue, CoGroupCombiner](
createCombiner, mergeValue, mergeCombiners)
}
override def clearDependencies() {
super.clearDependencies()
rdds = null
}
}
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