aboutsummaryrefslogtreecommitdiff
path: root/mllib/src/main/scala/org/apache/spark/ml/regression/RandomForestRegressor.scala
blob: 798947b94a2802a9a774d90406a82b1b87b9d2f4 (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
/*
 * Licensed to the Apache Software Foundation (ASF) under one or more
 * contributor license agreements.  See the NOTICE file distributed with
 * this work for additional information regarding copyright ownership.
 * The ASF licenses this file to You under the Apache License, Version 2.0
 * (the "License"); you may not use this file except in compliance with
 * the License.  You may obtain a copy of the License at
 *
 *    http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

package org.apache.spark.ml.regression

import org.apache.spark.annotation.{Experimental, Since}
import org.apache.spark.ml.{PredictionModel, Predictor}
import org.apache.spark.ml.param.ParamMap
import org.apache.spark.ml.tree.{DecisionTreeModel, RandomForestParams, TreeEnsembleModel, TreeRegressorParams}
import org.apache.spark.ml.tree.impl.RandomForest
import org.apache.spark.ml.util.{Identifiable, MetadataUtils}
import org.apache.spark.mllib.linalg.Vector
import org.apache.spark.mllib.regression.LabeledPoint
import org.apache.spark.mllib.tree.configuration.{Algo => OldAlgo}
import org.apache.spark.mllib.tree.model.{RandomForestModel => OldRandomForestModel}
import org.apache.spark.rdd.RDD
import org.apache.spark.sql.DataFrame
import org.apache.spark.sql.functions._


/**
 * :: Experimental ::
 * [[http://en.wikipedia.org/wiki/Random_forest  Random Forest]] learning algorithm for regression.
 * It supports both continuous and categorical features.
 */
@Since("1.4.0")
@Experimental
final class RandomForestRegressor @Since("1.4.0") (@Since("1.4.0") override val uid: String)
  extends Predictor[Vector, RandomForestRegressor, RandomForestRegressionModel]
  with RandomForestParams with TreeRegressorParams {

  @Since("1.4.0")
  def this() = this(Identifiable.randomUID("rfr"))

  // Override parameter setters from parent trait for Java API compatibility.

  // Parameters from TreeRegressorParams:
  @Since("1.4.0")
  override def setMaxDepth(value: Int): this.type = super.setMaxDepth(value)

  @Since("1.4.0")
  override def setMaxBins(value: Int): this.type = super.setMaxBins(value)

  @Since("1.4.0")
  override def setMinInstancesPerNode(value: Int): this.type =
    super.setMinInstancesPerNode(value)

  @Since("1.4.0")
  override def setMinInfoGain(value: Double): this.type = super.setMinInfoGain(value)

  @Since("1.4.0")
  override def setMaxMemoryInMB(value: Int): this.type = super.setMaxMemoryInMB(value)

  @Since("1.4.0")
  override def setCacheNodeIds(value: Boolean): this.type = super.setCacheNodeIds(value)

  @Since("1.4.0")
  override def setCheckpointInterval(value: Int): this.type = super.setCheckpointInterval(value)

  @Since("1.4.0")
  override def setImpurity(value: String): this.type = super.setImpurity(value)

  // Parameters from TreeEnsembleParams:
  @Since("1.4.0")
  override def setSubsamplingRate(value: Double): this.type = super.setSubsamplingRate(value)

  @Since("1.4.0")
  override def setSeed(value: Long): this.type = super.setSeed(value)

  // Parameters from RandomForestParams:
  @Since("1.4.0")
  override def setNumTrees(value: Int): this.type = super.setNumTrees(value)

  @Since("1.4.0")
  override def setFeatureSubsetStrategy(value: String): this.type =
    super.setFeatureSubsetStrategy(value)

  override protected def train(dataset: DataFrame): RandomForestRegressionModel = {
    val categoricalFeatures: Map[Int, Int] =
      MetadataUtils.getCategoricalFeatures(dataset.schema($(featuresCol)))
    val oldDataset: RDD[LabeledPoint] = extractLabeledPoints(dataset)
    val strategy =
      super.getOldStrategy(categoricalFeatures, numClasses = 0, OldAlgo.Regression, getOldImpurity)
    val trees =
      RandomForest.run(oldDataset, strategy, getNumTrees, getFeatureSubsetStrategy, getSeed)
        .map(_.asInstanceOf[DecisionTreeRegressionModel])
    val numFeatures = oldDataset.first().features.size
    new RandomForestRegressionModel(trees, numFeatures)
  }

  @Since("1.4.0")
  override def copy(extra: ParamMap): RandomForestRegressor = defaultCopy(extra)
}

@Since("1.4.0")
@Experimental
object RandomForestRegressor {
  /** Accessor for supported impurity settings: variance */
  @Since("1.4.0")
  final val supportedImpurities: Array[String] = TreeRegressorParams.supportedImpurities

  /** Accessor for supported featureSubsetStrategy settings: auto, all, onethird, sqrt, log2 */
  @Since("1.4.0")
  final val supportedFeatureSubsetStrategies: Array[String] =
    RandomForestParams.supportedFeatureSubsetStrategies
}

/**
 * :: Experimental ::
 * [[http://en.wikipedia.org/wiki/Random_forest  Random Forest]] model for regression.
 * It supports both continuous and categorical features.
 * @param _trees  Decision trees in the ensemble.
 * @param numFeatures  Number of features used by this model
 */
@Since("1.4.0")
@Experimental
final class RandomForestRegressionModel private[ml] (
    override val uid: String,
    private val _trees: Array[DecisionTreeRegressionModel],
    override val numFeatures: Int)
  extends PredictionModel[Vector, RandomForestRegressionModel]
  with TreeEnsembleModel with Serializable {

  require(numTrees > 0, "RandomForestRegressionModel requires at least 1 tree.")

  /**
   * Construct a random forest regression model, with all trees weighted equally.
   * @param trees  Component trees
   */
  private[ml] def this(trees: Array[DecisionTreeRegressionModel], numFeatures: Int) =
    this(Identifiable.randomUID("rfr"), trees, numFeatures)

  @Since("1.4.0")
  override def trees: Array[DecisionTreeModel] = _trees.asInstanceOf[Array[DecisionTreeModel]]

  // Note: We may add support for weights (based on tree performance) later on.
  private lazy val _treeWeights: Array[Double] = Array.fill[Double](numTrees)(1.0)

  @Since("1.4.0")
  override def treeWeights: Array[Double] = _treeWeights

  override protected def transformImpl(dataset: DataFrame): DataFrame = {
    val bcastModel = dataset.sqlContext.sparkContext.broadcast(this)
    val predictUDF = udf { (features: Any) =>
      bcastModel.value.predict(features.asInstanceOf[Vector])
    }
    dataset.withColumn($(predictionCol), predictUDF(col($(featuresCol))))
  }

  override protected def predict(features: Vector): Double = {
    // TODO: When we add a generic Bagging class, handle transform there.  SPARK-7128
    // Predict average of tree predictions.
    // Ignore the weights since all are 1.0 for now.
    _trees.map(_.rootNode.predictImpl(features).prediction).sum / numTrees
  }

  @Since("1.4.0")
  override def copy(extra: ParamMap): RandomForestRegressionModel = {
    copyValues(new RandomForestRegressionModel(uid, _trees, numFeatures), extra).setParent(parent)
  }

  @Since("1.4.0")
  override def toString: String = {
    s"RandomForestRegressionModel (uid=$uid) with $numTrees trees"
  }

  /**
   * Estimate of the importance of each feature.
   *
   * This generalizes the idea of "Gini" importance to other losses,
   * following the explanation of Gini importance from "Random Forests" documentation
   * by Leo Breiman and Adele Cutler, and following the implementation from scikit-learn.
   *
   * This feature importance is calculated as follows:
   *  - Average over trees:
   *     - importance(feature j) = sum (over nodes which split on feature j) of the gain,
   *       where gain is scaled by the number of instances passing through node
   *     - Normalize importances for tree to sum to 1.
   *  - Normalize feature importance vector to sum to 1.
   */
  @Since("1.5.0")
  lazy val featureImportances: Vector = RandomForest.featureImportances(trees, numFeatures)

  /** (private[ml]) Convert to a model in the old API */
  private[ml] def toOld: OldRandomForestModel = {
    new OldRandomForestModel(OldAlgo.Regression, _trees.map(_.toOld))
  }
}

private[ml] object RandomForestRegressionModel {

  /** (private[ml]) Convert a model from the old API */
  def fromOld(
      oldModel: OldRandomForestModel,
      parent: RandomForestRegressor,
      categoricalFeatures: Map[Int, Int],
      numFeatures: Int = -1): RandomForestRegressionModel = {
    require(oldModel.algo == OldAlgo.Regression, "Cannot convert RandomForestModel" +
      s" with algo=${oldModel.algo} (old API) to RandomForestRegressionModel (new API).")
    val newTrees = oldModel.trees.map { tree =>
      // parent for each tree is null since there is no good way to set this.
      DecisionTreeRegressionModel.fromOld(tree, null, categoricalFeatures)
    }
    new RandomForestRegressionModel(parent.uid, newTrees, numFeatures)
  }
}