# # Licensed to the Apache Software Foundation (ASF) under one or more # contributor license agreements. See the NOTICE file distributed with # this work for additional information regarding copyright ownership. # The ASF licenses this file to You under the Apache License, Version 2.0 # (the "License"); you may not use this file except in compliance with # the License. You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # from numpy import array, dot from math import sqrt from pyspark import SparkContext from pyspark.mllib._common import \ _get_unmangled_rdd, _get_unmangled_double_vector_rdd, \ _serialize_double_matrix, _deserialize_double_matrix, \ _serialize_double_vector, _deserialize_double_vector, \ _get_initial_weights, _serialize_rating, _regression_train_wrapper class KMeansModel(object): """A clustering model derived from the k-means method. >>> data = array([0.0,0.0, 1.0,1.0, 9.0,8.0, 8.0,9.0]).reshape(4,2) >>> clusters = KMeans.train(sc, sc.parallelize(data), 2, maxIterations=10, runs=30, initialization_mode="random") >>> clusters.predict(array([0.0, 0.0])) == clusters.predict(array([1.0, 1.0])) True >>> clusters.predict(array([8.0, 9.0])) == clusters.predict(array([9.0, 8.0])) True >>> clusters = KMeans.train(sc, sc.parallelize(data), 2) """ def __init__(self, centers_): self.centers = centers_ def predict(self, x): """Find the cluster to which x belongs in this model.""" best = 0 best_distance = 1e75 for i in range(0, self.centers.shape[0]): diff = x - self.centers[i] distance = sqrt(dot(diff, diff)) if distance < best_distance: best = i best_distance = distance return best class KMeans(object): @classmethod def train(cls, sc, data, k, maxIterations=100, runs=1, initialization_mode="k-means||"): """Train a k-means clustering model.""" dataBytes = _get_unmangled_double_vector_rdd(data) ans = sc._jvm.PythonMLLibAPI().trainKMeansModel(dataBytes._jrdd, k, maxIterations, runs, initialization_mode) if len(ans) != 1: raise RuntimeError("JVM call result had unexpected length") elif type(ans[0]) != bytearray: raise RuntimeError("JVM call result had first element of type " + type(ans[0]) + " which is not bytearray") return KMeansModel(_deserialize_double_matrix(ans[0])) def _test(): import doctest globs = globals().copy() globs['sc'] = SparkContext('local[4]', 'PythonTest', batchSize=2) (failure_count, test_count) = doctest.testmod(globs=globs, optionflags=doctest.ELLIPSIS) globs['sc'].stop() if failure_count: exit(-1) if __name__ == "__main__": _test()