Merge branch 'master' into add-slot-eligibility-arms

1 files changed, 190 insertions, 3 deletions

diff --git a/src/main/scala/xyz/driver/pdsuidomain/entities/Intervention.scala b/src/main/scala/xyz/driver/pdsuidomain/entities/Intervention.scala
index a8c22a2..a838d64 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/entities/Intervention.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/entities/Intervention.scala
@@ -2,10 +2,186 @@ package xyz.driver.pdsuidomain.entities
 
 import xyz.driver.pdsuicommon.domain.{LongId, StringId}
 import xyz.driver.pdsuicommon.logging._
+import xyz.driver.pdsuidomain.entities.InterventionType.DeliveryMethod
+import xyz.driver.pdsuidomain.entities.InterventionType.DeliveryMethod._
 
-final case class InterventionType(id: LongId[InterventionType], name: String)
+sealed trait InterventionType {
+  val id: LongId[InterventionType]
+  val name: String
+  val deliveryMethods: Set[DeliveryMethod]
+}
 
 object InterventionType {
+
+  final case object RadiationTherapy extends InterventionType {
+    val id: LongId[InterventionType]         = LongId[InterventionType](1)
+    val name: String                         = "Radiation therapy"
+    val deliveryMethods: Set[DeliveryMethod] = commonMethods
+  }
+
+  final case object Chemotherapy extends InterventionType {
+    val id: LongId[InterventionType]         = LongId[InterventionType](2)
+    val name: String                         = "Chemotherapy"
+    val deliveryMethods: Set[DeliveryMethod] = commonMethods
+  }
+
+  final case object TargetedTherapy extends InterventionType {
+    val id: LongId[InterventionType]         = LongId[InterventionType](3)
+    val name: String                         = "Targeted therapy"
+    val deliveryMethods: Set[DeliveryMethod] = commonMethods
+  }
+
+  final case object Immunotherapy extends InterventionType {
+    val id: LongId[InterventionType]         = LongId[InterventionType](4)
+    val name: String                         = "Immunotherapy"
+    val deliveryMethods: Set[DeliveryMethod] = commonMethods
+  }
+
+  final case object Surgery extends InterventionType {
+    val id: LongId[InterventionType]         = LongId[InterventionType](5)
+    val name: String                         = "Surgery"
+    val deliveryMethods: Set[DeliveryMethod] = commonMethods
+  }
+
+  final case object HormoneTherapy extends InterventionType {
+    val id: LongId[InterventionType]         = LongId[InterventionType](6)
+    val name: String                         = "Hormone therapy"
+    val deliveryMethods: Set[DeliveryMethod] = commonMethods
+  }
+
+  final case object Other extends InterventionType {
+    val id: LongId[InterventionType]         = LongId[InterventionType](7)
+    val name: String                         = "Other"
+    val deliveryMethods: Set[DeliveryMethod] = commonMethods
+  }
+
+  final case object Radiation extends InterventionType {
+    val id: LongId[InterventionType] = LongId[InterventionType](8)
+    val name: String                 = "Radiation"
+    val deliveryMethods: Set[DeliveryMethod] = Set(
+      ExternalRadiationTherapy,
+      Brachytherapy,
+      SystemicRadiationTherapyIV,
+      SystemicRadiationTherapyOral,
+      ProtonBeamTherapy
+    )
+  }
+
+  final case object SurgeryProcedure extends InterventionType {
+    val id: LongId[InterventionType] = LongId[InterventionType](9)
+    val name: String                 = "Surgery/Procedure"
+    val deliveryMethods: Set[DeliveryMethod] = Set(
+      RadioFrequencyAblationRFA,
+      Cryoablation,
+      TherapeuticConventionalSurgery,
+      RoboticAssistedLaparoscopicSurgery
+    )
+  }
+
+  def typeFromString: PartialFunction[String, InterventionType] = {
+    case "Radiation therapy" => RadiationTherapy
+    case "Chemotherapy"      => Chemotherapy
+    case "Targeted therapy"  => TargetedTherapy
+    case "Immunotherapy"     => Immunotherapy
+    case "Surgery"           => Surgery
+    case "Hormone therapy"   => HormoneTherapy
+    case "Other"             => Other
+    case "Radiation"         => Radiation
+    case "Surgery/Procedure" => SurgeryProcedure
+  }
+
+  sealed trait DeliveryMethod
+  object DeliveryMethod {
+    case object IntravenousInfusionIV              extends DeliveryMethod
+    case object IntramuscularInjection             extends DeliveryMethod
+    case object SubcutaneousInjection              extends DeliveryMethod
+    case object IntradermalInjection               extends DeliveryMethod
+    case object SpinalInjection                    extends DeliveryMethod
+    case object Oral                               extends DeliveryMethod
+    case object Topical                            extends DeliveryMethod
+    case object TransdermalPatch                   extends DeliveryMethod
+    case object Inhalation                         extends DeliveryMethod
+    case object Rectal                             extends DeliveryMethod
+    case object ExternalRadiationTherapy           extends DeliveryMethod
+    case object Brachytherapy                      extends DeliveryMethod
+    case object SystemicRadiationTherapyIV         extends DeliveryMethod
+    case object SystemicRadiationTherapyOral       extends DeliveryMethod
+    case object ProtonBeamTherapy                  extends DeliveryMethod
+    case object RadioFrequencyAblationRFA          extends DeliveryMethod
+    case object Cryoablation                       extends DeliveryMethod
+    case object TherapeuticConventionalSurgery     extends DeliveryMethod
+    case object RoboticAssistedLaparoscopicSurgery extends DeliveryMethod
+
+    def fromString: PartialFunction[String, DeliveryMethod] = {
+      case "Intravenous Infusion (IV)"             => IntravenousInfusionIV
+      case "Intramuscular Injection"               => IntramuscularInjection
+      case "Subcutaneous Injection"                => SubcutaneousInjection
+      case "Intradermal Injection"                 => IntradermalInjection
+      case "Spinal Injection"                      => SpinalInjection
+      case "Oral"                                  => Oral
+      case "Topical"                               => Topical
+      case "Transdermal Patch"                     => TransdermalPatch
+      case "Inhalation"                            => Inhalation
+      case "Rectal"                                => Rectal
+      case "External Radiation Therapy"            => ExternalRadiationTherapy
+      case "Brachytherapy"                         => Brachytherapy
+      case "Systemic Radiation Therapy (IV)"       => SystemicRadiationTherapyIV
+      case "Systemic Radiation Therapy (Oral)"     => SystemicRadiationTherapyOral
+      case "Proton Beam Therapy"                   => ProtonBeamTherapy
+      case "Radio-Frequency Ablation (RFA)"        => RadioFrequencyAblationRFA
+      case "Cryoablation"                          => Cryoablation
+      case "Therapeutic Conventional Surgery"      => TherapeuticConventionalSurgery
+      case "Robotic Assisted Laparoscopic Surgery" => RoboticAssistedLaparoscopicSurgery
+    }
+
+    def methodToString(x: DeliveryMethod): String = x match {
+      case IntravenousInfusionIV              => "Intravenous Infusion (IV)"
+      case IntramuscularInjection             => "Intramuscular Injection"
+      case SubcutaneousInjection              => "Subcutaneous Injection"
+      case IntradermalInjection               => "Intradermal Injection"
+      case SpinalInjection                    => "Spinal Injection"
+      case Oral                               => "Oral"
+      case Topical                            => "Topical"
+      case TransdermalPatch                   => "Transdermal Patch"
+      case Inhalation                         => "Inhalation"
+      case Rectal                             => "Rectal"
+      case ExternalRadiationTherapy           => "External Radiation Therapy"
+      case Brachytherapy                      => "Brachytherapy"
+      case SystemicRadiationTherapyIV         => "Systemic Radiation Therapy (IV)"
+      case SystemicRadiationTherapyOral       => "Systemic Radiation Therapy (Oral)"
+      case ProtonBeamTherapy                  => "Proton Beam Therapy"
+      case RadioFrequencyAblationRFA          => "Radio-Frequency Ablation (RFA)"
+      case Cryoablation                       => "Cryoablation"
+      case TherapeuticConventionalSurgery     => "Therapeutic Conventional Surgery"
+      case RoboticAssistedLaparoscopicSurgery => "Robotic Assisted Laparoscopic Surgery"
+    }
+  }
+
+  val commonMethods = Set[DeliveryMethod](
+    IntravenousInfusionIV,
+    IntramuscularInjection,
+    SubcutaneousInjection,
+    IntradermalInjection,
+    SpinalInjection,
+    Oral,
+    Topical,
+    TransdermalPatch,
+    Inhalation,
+    Rectal
+  )
+
+  val All: Map[LongId[InterventionType], InterventionType] = Map[LongId[InterventionType], InterventionType](
+    LongId[InterventionType](1) -> RadiationTherapy,
+    LongId[InterventionType](2) -> Chemotherapy,
+    LongId[InterventionType](3) -> TargetedTherapy,
+    LongId[InterventionType](4) -> Immunotherapy,
+    LongId[InterventionType](5) -> Surgery,
+    LongId[InterventionType](6) -> HormoneTherapy,
+    LongId[InterventionType](7) -> Other,
+    LongId[InterventionType](8) -> Radiation,
+    LongId[InterventionType](9) -> SurgeryProcedure
+  )
+
   implicit def toPhiString(x: InterventionType): PhiString = {
     import x._
     phi"InterventionType(id=$id, name=${Unsafe(name)})"
@@ -29,12 +205,23 @@ final case class Intervention(id: LongId[Intervention],
                               originalType: Option[String],
                               dosage: String,
                               originalDosage: String,
-                              isActive: Boolean)
+                              isActive: Boolean,
+                              deliveryMethod: Option[String]) {
+  def deliveryMethodIsCorrect: Boolean = {
+    if (this.typeId.nonEmpty) {
+      this.deliveryMethod.nonEmpty &&
+      InterventionType.All
+        .getOrElse(this.typeId.get, throw new IllegalArgumentException(s"Not found Intervention type ${this.typeId}"))
+        .deliveryMethods
+        .contains(DeliveryMethod.fromString(this.deliveryMethod.get))
+    } else true
+  }
+}
 
 object Intervention {
   implicit def toPhiString(x: Intervention): PhiString = {
     import x._
-    phi"Intervention(id=$id, trialId=$trialId, name=${Unsafe(name)}, typeId=$typeId, isActive=$isActive)"
+    phi"Intervention(id=$id, trialId=$trialId, name=${Unsafe(name)}, typeId=$typeId, isActive=$isActive, deliveryMethod=${Unsafe(deliveryMethod)})"
   }
 }