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authorvlad <vlad@driver.xyz>2017-06-13 16:12:20 -0700
committervlad <vlad@driver.xyz>2017-06-13 16:12:20 -0700
commitcd1b635b2ae90d9ac2d8b1779183a1fbd8c5fd5c (patch)
tree062e8dad1a1513e26b0fd08b1742d6ff2ee874f7 /src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala
parent0000a65ab4479a2a40e2d6468036438e9705b4aa (diff)
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Adding domain entitiesv0.1.0
Diffstat (limited to 'src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala')
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala51
1 files changed, 51 insertions, 0 deletions
diff --git a/src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala b/src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala
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+++ b/src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala
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+package xyz.driver.pdsuidomain.entities.export.trial
+
+import java.time.LocalDateTime
+
+import xyz.driver.pdsuicommon.domain.{StringId, UuidId}
+import xyz.driver.pdsuicommon.logging._
+import xyz.driver.pdsuidomain.entities.{RawTrialLabel, Trial}
+
+import scala.collection.breakOut
+
+case class ExportTrialWithLabels(nctId: StringId[Trial],
+ trialId: UuidId[Trial],
+ condition: String,
+ lastReviewed: LocalDateTime,
+ labelVersion: Long,
+ arms: List[ExportTrialArm],
+ criteria: List[ExportTrialLabelCriterion])
+
+object ExportTrialWithLabels {
+
+ implicit def toPhiString(x: ExportTrialWithLabels): PhiString = {
+ import x._
+ phi"TrialWithLabels(nctId=$nctId, trialId=$trialId, condition=${Unsafe(condition)}, " +
+ phi"lastReviewed=$lastReviewed, labelVersion=${Unsafe(labelVersion)}, arms=$arms, criteria=$criteria)"
+ }
+
+ def fromRaw(rawData: List[RawTrialLabel]): ExportTrialWithLabels = {
+ val trials: Set[StringId[Trial]] = rawData.map(_.nctId)(breakOut)
+
+ assert(trials.size == 1, "There are more than one trials in the rawData")
+ val trial = rawData.head
+
+ ExportTrialWithLabels(
+ nctId = trial.nctId,
+ trialId = trial.trialId,
+ condition = trial.condition,
+ lastReviewed = trial.lastReviewed,
+ labelVersion = 1, // TODO It is needed to replace this mock label version.
+ arms = rawData.groupBy(_.armId).map { case (armId, rawTrials) =>
+ ExportTrialArm(armId, rawTrials.head.armName)
+ }(breakOut),
+ criteria = rawData.groupBy { x =>
+ (x.criterionId, x.labelId)
+ }.map {
+ case (_, rawTrialLabels) =>
+ val armIds = rawTrialLabels.map(_.criterionArmId).toSet
+ ExportTrialLabelCriterion.fromRaw(rawTrialLabels.head, armIds)
+ }(breakOut)
+ )
+ }
+}