1 files changed, 0 insertions, 108 deletions
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/eligibility.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/eligibility.scala
deleted file mode 100644
index 925ba65..0000000
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/eligibility.scala
+++ /dev/null
@@ -1,108 +0,0 @@
-package xyz.driver.pdsuidomain.formats.json
-
-import spray.json.DefaultJsonProtocol._
-import spray.json._
-import DefaultJsonProtocol._
-import xyz.driver.core.Id
-import xyz.driver.core.json._
-import xyz.driver.entities.labels.LabelValue
-import xyz.driver.pdsuidomain.entities.eligibility._
-
-object eligibility {
-  import export._
-  import xyz.driver.formats.json.assay._
-  import xyz.driver.formats.json.common._
-  import xyz.driver.formats.json.labels._
-  import xyz.driver.formats.json.process._
-  import xyz.driver.pdsuidomain.formats.json.document._
-  import xyz.driver.pdsuidomain.formats.json.record._
-  import xyz.driver.pdsuidomain.formats.json.export._
-
-  implicit val molecularDocumentFormat: RootJsonFormat[MolecularEvidenceDocument] = jsonFormat7(
-    MolecularEvidenceDocument)
-  implicit val clinicalDocumentFormat: RootJsonFormat[ClinicalEvidenceDocument] = jsonFormat7(ClinicalEvidenceDocument)
-
-  implicit val evidenceDocumentFormat: RootJsonFormat[EvidenceDocument] =
-    GadtJsonFormat.create[EvidenceDocument]("evidenceDocumentType") {
-      case _: MolecularEvidenceDocument => "Molecular"
-      case _: ClinicalEvidenceDocument  => "Clinical"
-    } {
-      case "Molecular" => molecularDocumentFormat
-      case "Clinical"  => clinicalDocumentFormat
-    }
-
-  implicit object evidenceFormat extends RootJsonFormat[Evidence] {
-
-    override def write(evidence: Evidence): JsValue = {
-      JsObject(
-        "evidenceId"     -> evidence.evidenceId.toJson,
-        "evidenceText"   -> evidence.evidenceText.toJson,
-        "labelValue"     -> evidence.labelValue.toJson,
-        "document"       -> evidence.document.toJson,
-        "isPrimaryValue" -> evidence.isPrimaryValue.toJson
-      )
-    }
-
-    override def read(json: JsValue): Evidence = {
-      json match {
-        case JsObject(fields) =>
-          val evidenceId = fields
-            .get("evidenceId")
-            .map(_.convertTo[Id[Evidence]])
-
-          val evidenceText = fields
-            .get("evidenceText")
-            .map(_.convertTo[String])
-            .getOrElse(deserializationError(s"Evidence json object do not contain 'evidenceText' field: $json"))
-
-          val labelValue = fields
-            .get("labelValue")
-            .map(_.convertTo[LabelValue])
-            .getOrElse(deserializationError(s"Evidence json object do not contain 'labelValue' field: $json"))
-
-          val isDriverDocument = fields
-            .get("document")
-            .flatMap {
-              case JsObject(fieldMap) =>
-                fieldMap
-                  .get("isDriverDocument")
-                  .map(_.convertTo[Boolean])
-              case _ => deserializationError(s"Expected Json Object as 'isDriverDocument', but got $json")
-            }
-            .getOrElse(deserializationError(s"Evidence json object do not contain 'document' field: $json"))
-
-          val document = customDocumentParser(isDriverDocument, fields, json)
-
-          val isPrimaryValue = fields
-            .get("isPrimaryValue")
-            .map(_.convertTo[Option[Boolean]])
-            .getOrElse(deserializationError(s"Evidence json object do not contain 'isPrimaryValue' field: $json"))
-
-          Evidence(evidenceId, evidenceText, labelValue, document, isPrimaryValue)
-        case _ => deserializationError(s"Expected Json Object as 'Evidence', but got $json")
-      }
-    }
-
-    def customDocumentParser(isDriverDocument: Boolean,
-                             fields: Map[String, JsValue],
-                             json: JsValue): EvidenceDocument = {
-      fields.get("document").fold { deserializationError(s"Expected Json Object as 'Document', but got $json") } {
-        document =>
-          if (isDriverDocument) document.convertTo[MolecularEvidenceDocument]
-          else document.convertTo[ClinicalEvidenceDocument]
-      }
-    }
-  }
-
-  implicit def labelWithEvidenceJsonFormat: RootJsonFormat[LabelEvidence] = jsonFormat2(LabelEvidence)
-
-  implicit def labelRankingFormat: RootJsonFormat[LabelMismatchRank]     = jsonFormat4(LabelMismatchRank)
-  implicit def labelRankingsFormat: RootJsonFormat[MismatchRankedLabels] = jsonFormat2(MismatchRankedLabels)
-
-  implicit def matchedPatientFormat: RootJsonFormat[MatchedPatient] = jsonFormat6(MatchedPatient)
-
-  implicit lazy val eligibleTrialFormat: RootJsonFormat[EligibleTrial] = jsonFormat2(EligibleTrial.apply)
-  implicit lazy val eligibleArmFormat: RootJsonFormat[EligibleArm] = jsonFormat2(EligibleArm.apply)
-  implicit lazy val eligibleCriterionFormat: RootJsonFormat[EligibleCriterion] = jsonFormat2(EligibleCriterion.apply)
-
-}