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package xyz.driver.pdsuidomain.formats.json
import spray.json._
import xyz.driver.core.json.idFormat
import xyz.driver.entities.labels.Label
import xyz.driver.formats.json.labels._
import xyz.driver.pdsuicommon.domain.LongId
import xyz.driver.pdsuidomain.entities.export.patient._
import xyz.driver.pdsuidomain.entities.export.trial.{ExportTrialArm, ExportTrialLabelCriterion, ExportTrialWithLabels}
import xyz.driver.pdsuidomain.entities.{Criterion, EligibilityArm}
object export {
import DefaultJsonProtocol._
import common._
import document._
import record._
private def deserializationErrorFieldMessage(field: String, json: JsValue)(implicit className: String) = {
deserializationError(s"$className json object do not contain '$field' field: $json")
}
private def deserializationErrorEntityMessage(json: JsValue)(implicit className: String) = {
deserializationError(s"Expected Json Object as $className, but got $json")
}
implicit val patientLabelEvidenceDocumentFormat: RootJsonFormat[ExportPatientLabelEvidenceDocument] =
jsonFormat5(ExportPatientLabelEvidenceDocument.apply)
implicit val patientLabelEvidenceFormat: RootJsonFormat[ExportPatientLabelEvidence] =
jsonFormat(ExportPatientLabelEvidence.apply, "evidenceId", "labelValue", "evidenceText", "document")
implicit val patientLabelFormat: RootJsonFormat[ExportPatientLabel] =
jsonFormat(ExportPatientLabel.apply, "labelId", "evidence")
implicit val patientWithLabelsFormat: RootJsonFormat[ExportPatientWithLabels] =
jsonFormat(ExportPatientWithLabels.apply, "patientId", "labelVersion", "labels")
implicit val trialArmFormat: RootJsonFormat[ExportTrialArm] = jsonFormat3(ExportTrialArm.apply)
implicit val trialLabelCriterionFormat: RootJsonFormat[ExportTrialLabelCriterion] =
new RootJsonFormat[ExportTrialLabelCriterion] {
implicit val className: String = "ExportTrialLabelCriterion"
override def write(obj: ExportTrialLabelCriterion): JsValue =
JsObject(
"value" -> obj.value
.map {
case true => "Yes"
case false => "No"
}
.getOrElse("Unknown")
.toJson,
"labelId" -> obj.labelId.toJson,
"criterionId" -> obj.criterionId.toJson,
"criterionText" -> obj.criteria.toJson,
"armIds" -> obj.armIds.toJson,
"isCompound" -> obj.isCompound.toJson,
"isDefining" -> obj.isDefining.toJson,
"inclusion" -> obj.inclusion.toJson
)
override def read(json: JsValue): ExportTrialLabelCriterion = {
json match {
case JsObject(fields) =>
val value = fields
.get("value")
.map(_.convertTo[String])
.map {
case "Yes" => Option(true)
case "No" => Option(false)
case "Unknown" => Option.empty[Boolean]
}
.getOrElse(deserializationErrorFieldMessage("value", json))
val labelId = fields
.get("labelId")
.map(_.convertTo[LongId[Label]])
.getOrElse(deserializationErrorFieldMessage("labelId", json))
val criterionId = fields
.get("criterionId")
.map(_.convertTo[LongId[Criterion]])
.getOrElse(deserializationErrorFieldMessage("criterionId", json))
val criterionText = fields
.get("criterionText")
.map(_.convertTo[String])
.getOrElse(deserializationErrorFieldMessage("criterionText", json))
val armIds = fields
.get("armIds")
.map(_.convertTo[Set[LongId[EligibilityArm]]])
.getOrElse(deserializationErrorFieldMessage("armIds", json))
val isCompound = fields
.get("isCompound")
.map(_.convertTo[Boolean])
.getOrElse(deserializationErrorFieldMessage("isCompound", json))
val isDefining = fields
.get("isDefining")
.map(_.convertTo[Boolean])
.getOrElse(deserializationErrorFieldMessage("isDefining", json))
val inclusion = fields
.get("inclusion")
.flatMap(_.convertTo[Option[Boolean]])
ExportTrialLabelCriterion(
criterionId,
value,
labelId,
armIds,
criterionText,
isCompound,
isDefining,
inclusion
)
case _ => deserializationErrorEntityMessage(json)
}
}
}
implicit val trialWithLabelsFormat: RootJsonFormat[ExportTrialWithLabels] =
jsonFormat(ExportTrialWithLabels.apply, "nctId", "trialId", "lastReviewed", "labelVersion", "arms", "criteria")
}
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