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authorKseniya Tomskikh <ktomskih@datamonsters.co>2017-08-02 15:25:17 +0600
committerKseniya Tomskikh <ktomskih@datamonsters.co>2017-08-02 16:54:04 +0600
commit98cecaebc650584f66d8c28c8424e8481c4814cc (patch)
tree01e7b230c5ce8599b4f726a5abc7664d8e08bb07
parent31d5b35549fa49413692ecb3ecba7ee4c0b9cb4d (diff)
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PDSUI-2181 Created entities for patient history
-rw-r--r--src/main/scala/xyz/driver/pdsuicommon/acl/ACL.scala36
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/entities/PatientHistory.scala92
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/patienthistory/ApiPatientHistory.scala28
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/services/PatientHistoryService.scala48
4 files changed, 196 insertions, 8 deletions
diff --git a/src/main/scala/xyz/driver/pdsuicommon/acl/ACL.scala b/src/main/scala/xyz/driver/pdsuicommon/acl/ACL.scala
index 07d5014..f21c165 100644
--- a/src/main/scala/xyz/driver/pdsuicommon/acl/ACL.scala
+++ b/src/main/scala/xyz/driver/pdsuicommon/acl/ACL.scala
@@ -85,7 +85,11 @@ object ACL extends PhiLogging {
extends BaseACL(
label = "extracted data",
create = Set(DocumentExtractor, RecordAdmin),
- read = Set(DocumentExtractor, RecordAdmin, RoutesCurator, TreatmentMatchingAdmin, ResearchOncologist),
+ read = Set(DocumentExtractor,
+ RecordAdmin,
+ RoutesCurator,
+ TreatmentMatchingAdmin,
+ ResearchOncologist),
update = Set(DocumentExtractor, RecordAdmin),
delete = Set(DocumentExtractor, RecordAdmin)
)
@@ -151,7 +155,11 @@ object ACL extends PhiLogging {
extends BaseACL(
label = "criterion",
create = Set(CriteriaCurator, TrialAdmin),
- read = Set(CriteriaCurator, TrialAdmin, RoutesCurator, TreatmentMatchingAdmin, ResearchOncologist),
+ read = Set(CriteriaCurator,
+ TrialAdmin,
+ RoutesCurator,
+ TreatmentMatchingAdmin,
+ ResearchOncologist),
update = Set(CriteriaCurator, TrialAdmin),
delete = Set(CriteriaCurator, TrialAdmin)
)
@@ -187,6 +195,12 @@ object ACL extends PhiLogging {
update = TreatmentMatchingRoles
)
+ object PatientHistory
+ extends BaseACL(
+ label = "patient history",
+ read = Set(TreatmentMatchingAdmin)
+ )
+
object PatientIssue
extends BaseACL(
label = "patient issue",
@@ -238,26 +252,32 @@ object ACL extends PhiLogging {
update: AclCheck = Forbid,
delete: AclCheck = Forbid) {
- def isCreateAllow()(implicit requestContext: AuthenticatedRequestContext): Boolean = {
+ def isCreateAllow()(
+ implicit requestContext: AuthenticatedRequestContext): Boolean = {
check("create", create)(requestContext.executor.roles)
}
- def isReadAllow()(implicit requestContext: AuthenticatedRequestContext): Boolean = {
+ def isReadAllow()(
+ implicit requestContext: AuthenticatedRequestContext): Boolean = {
check("read", read)(requestContext.executor.roles)
}
- def isUpdateAllow()(implicit requestContext: AuthenticatedRequestContext): Boolean = {
+ def isUpdateAllow()(
+ implicit requestContext: AuthenticatedRequestContext): Boolean = {
check("update", update)(requestContext.executor.roles)
}
- def isDeleteAllow()(implicit requestContext: AuthenticatedRequestContext): Boolean = {
+ def isDeleteAllow()(
+ implicit requestContext: AuthenticatedRequestContext): Boolean = {
check("delete", delete)(requestContext.executor.roles)
}
- private def check(action: String, isAllowed: AclCheck)(executorRoles: Set[Role]): Boolean = {
+ private def check(action: String, isAllowed: AclCheck)(
+ executorRoles: Set[Role]): Boolean = {
loggedError(
executorRoles.exists(isAllowed),
- phi"${Unsafe(executorRoles.mkString(", "))} has no access to ${Unsafe(action)} a ${Unsafe(label)}"
+ phi"${Unsafe(executorRoles.mkString(", "))} has no access to ${Unsafe(
+ action)} a ${Unsafe(label)}"
)
}
}
diff --git a/src/main/scala/xyz/driver/pdsuidomain/entities/PatientHistory.scala b/src/main/scala/xyz/driver/pdsuidomain/entities/PatientHistory.scala
new file mode 100644
index 0000000..e00a5f6
--- /dev/null
+++ b/src/main/scala/xyz/driver/pdsuidomain/entities/PatientHistory.scala
@@ -0,0 +1,92 @@
+package xyz.driver.pdsuidomain.entities
+
+import java.time.{LocalDateTime, ZoneId}
+
+import xyz.driver.pdsuicommon.domain.{LongId, StringId, User, UuidId}
+import xyz.driver.pdsuicommon.logging._
+import xyz.driver.pdsuicommon.utils.Utils
+import xyz.driver.pdsuidomain.entities.PatientHistory.{Action, State}
+
+object PatientHistory {
+
+ implicit def toPhiString(x: PatientHistory): PhiString = {
+ import x._
+ phi"PatientHistory(id=$id, executor=$executor, patientId=$patientId, state=$state, action=$action, created=$created)"
+ }
+
+ sealed trait State
+ object State {
+ case object Verify extends State
+ case object Curate extends State
+ case object Review extends State
+ case object Flag extends State
+
+ val All: Set[State] = Set[State](Verify, Curate, Review, Flag)
+
+ val fromString: PartialFunction[String, State] = {
+ case "Verify" => State.Verify
+ case "Curate" => State.Curate
+ case "Review" => State.Review
+ case "Flag" => State.Flag
+ }
+
+ def stateToString(x: State): String = x match {
+ case State.Verify => "Verify"
+ case State.Curate => "Curate"
+ case State.Review => "Review"
+ case State.Flag => "Flag"
+ }
+
+ implicit def toPhiString(x: State): PhiString =
+ Unsafe(Utils.getClassSimpleName(x.getClass))
+ }
+
+ sealed trait Action extends Product with Serializable {
+
+ def oneOf(xs: Action*): Boolean = xs.contains(this)
+
+ def oneOf(xs: Set[Action]): Boolean = xs.contains(this)
+
+ }
+
+ object Action {
+ case object Start extends Action
+ case object Submit extends Action
+ case object Unassign extends Action
+ case object Resolve extends Action
+ case object Flag extends Action
+ case object Archive extends Action
+
+ val All: Set[Action] =
+ Set[Action](Start, Submit, Unassign, Resolve, Flag, Archive)
+
+ val fromString: PartialFunction[String, Action] = {
+ case "Start" => Action.Start
+ case "Submit" => Action.Submit
+ case "Unassign" => Action.Unassign
+ case "Resolve" => Action.Resolve
+ case "Flag" => Action.Flag
+ case "Archive" => Action.Archive
+ }
+
+ def actionToString(x: Action): String = x match {
+ case Action.Start => "Start"
+ case Action.Submit => "Submit"
+ case Action.Unassign => "Unassign"
+ case Action.Resolve => "Resolve"
+ case Action.Flag => "Flag"
+ case Action.Archive => "Archive"
+ }
+
+ implicit def toPhiString(x: Action): PhiString =
+ Unsafe(Utils.getClassSimpleName(x.getClass))
+ }
+
+}
+
+final case class PatientHistory(id: LongId[PatientHistory],
+ executor: StringId[User],
+ patientId: UuidId[Patient],
+ state: State,
+ action: Action,
+ created: LocalDateTime = LocalDateTime.now(ZoneId.of("Z")))
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/patienthistory/ApiPatientHistory.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/patienthistory/ApiPatientHistory.scala
new file mode 100644
index 0000000..cdcd510
--- /dev/null
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/patienthistory/ApiPatientHistory.scala
@@ -0,0 +1,28 @@
+package xyz.driver.pdsuidomain.formats.json.patienthistory
+
+import java.time.{ZoneId, ZonedDateTime}
+import java.util.UUID
+
+import play.api.libs.json.{Format, Json}
+import xyz.driver.pdsuidomain.entities.PatientHistory
+
+final case class ApiPatientHistory(id: Long,
+ executor: String,
+ patientId: UUID,
+ state: String,
+ action: String,
+ created: ZonedDateTime)
+
+object ApiPatientHistory {
+ implicit val format: Format[ApiPatientHistory] =
+ Json.format[ApiPatientHistory]
+
+ def fromDomain(x: PatientHistory) = ApiPatientHistory(
+ id = x.id.id,
+ executor = x.executor.id,
+ patientId = x.patientId.id,
+ state = PatientHistory.State.stateToString(x.state),
+ action = PatientHistory.Action.actionToString(x.action),
+ created = ZonedDateTime.of(x.created, ZoneId.of("Z"))
+ )
+}
diff --git a/src/main/scala/xyz/driver/pdsuidomain/services/PatientHistoryService.scala b/src/main/scala/xyz/driver/pdsuidomain/services/PatientHistoryService.scala
new file mode 100644
index 0000000..e312ca8
--- /dev/null
+++ b/src/main/scala/xyz/driver/pdsuidomain/services/PatientHistoryService.scala
@@ -0,0 +1,48 @@
+package xyz.driver.pdsuidomain.services
+
+import java.time.LocalDateTime
+
+import xyz.driver.pdsuicommon.auth.AuthenticatedRequestContext
+import xyz.driver.pdsuicommon.db.{Pagination, SearchFilterExpr, Sorting}
+import xyz.driver.pdsuicommon.domain.UuidId
+import xyz.driver.pdsuicommon.error.DomainError
+import xyz.driver.pdsuidomain.entities.{Patient, PatientHistory}
+
+import scala.concurrent.Future
+
+object PatientHistoryService {
+
+ trait DefaultNotFoundError {
+ def userMessage: String = "Patient history not found"
+ }
+
+ trait DefaultAccessDeniedError {
+ def userMessage: String = "Access denied"
+ }
+
+ sealed trait GetListReply
+ object GetListReply {
+ final case class EntityList(xs: Seq[PatientHistory],
+ totalFound: Int,
+ lastUpdate: Option[LocalDateTime])
+ extends GetListReply
+
+ final case object AuthorizationError
+ extends GetListReply
+ with DomainError.AuthorizationError
+ with DefaultAccessDeniedError
+ }
+
+}
+
+trait PatientHistoryService {
+
+ import PatientHistoryService._
+
+ def getListByPatientId(id: UuidId[Patient],
+ filter: SearchFilterExpr = SearchFilterExpr.Empty,
+ sorting: Option[Sorting] = None,
+ pagination: Option[Pagination] = None)(
+ implicit requestContext: AuthenticatedRequestContext): Future[GetListReply]
+
+}