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authorKseniya Tomskikh <ktomskih@datamonsters.co>2017-10-17 16:17:47 +0700
committerKseniya Tomskikh <ktomskih@datamonsters.co>2017-10-17 16:17:47 +0700
commiteb9a75c226b005e5989d2a6494160ebe0dd9d9e7 (patch)
treed8944dde0afa57273109d8fe959ab5d78a24c4a5 /src/main/scala/xyz/driver/pdsuicommon
parentc5d36593cc14bfdfb7b8f06d680ad6fc2eb6dde0 (diff)
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Fixed custom formats for rep and tricv0.9.0
Diffstat (limited to 'src/main/scala/xyz/driver/pdsuicommon')
-rw-r--r--src/main/scala/xyz/driver/pdsuicommon/utils/CustomSwaggerJsonFormats.scala158
1 files changed, 80 insertions, 78 deletions
diff --git a/src/main/scala/xyz/driver/pdsuicommon/utils/CustomSwaggerJsonFormats.scala b/src/main/scala/xyz/driver/pdsuicommon/utils/CustomSwaggerJsonFormats.scala
index b122fab..004a914 100644
--- a/src/main/scala/xyz/driver/pdsuicommon/utils/CustomSwaggerJsonFormats.scala
+++ b/src/main/scala/xyz/driver/pdsuicommon/utils/CustomSwaggerJsonFormats.scala
@@ -4,20 +4,16 @@ import java.time.{LocalDate, LocalDateTime}
import io.swagger.models.properties.Property
import spray.json.JsValue
-import xyz.driver.pdsuicommon.domain.{LongId, StringId, TextJson, UuidId}
+import xyz.driver.pdsuicommon.domain.{LongId, StringId, UuidId}
import xyz.driver.pdsuidomain.entities._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.arm._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.criterion._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.intervention._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.hypothesis._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.studydesign._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.trial._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.trialhistory._
-import xyz.driver.pdsuidomain.formats.json.sprayformats.trialissue._
+import xyz.driver.pdsuidomain.formats.json.sprayformats.ListResponse._
import xyz.driver.core.swagger.CustomSwaggerJsonConverter._
import xyz.driver.entities.patient.CancerType
import xyz.driver.pdsuicommon.concurrent.BridgeUploadQueue
+import xyz.driver.pdsuidomain.entities.export.patient.ExportPatientWithLabels
+import xyz.driver.pdsuidomain.entities.export.trial.ExportTrialWithLabels
import xyz.driver.pdsuidomain.fakes.entities.common
+import xyz.driver.pdsuidomain.formats.json.sprayformats.ListResponse
import xyz.driver.pdsuidomain.formats.json.sprayformats.bridgeuploadqueue._
import xyz.driver.pdsuidomain.formats.json.sprayformats.record._
import xyz.driver.pdsuidomain.formats.json.sprayformats.document._
@@ -47,35 +43,48 @@ object CustomSwaggerJsonFormats {
classOf[DocumentType] -> documentTypeFormat.write(common.nextDocumentType())
)
- val customTrialCurationProperties = immutable.Map[Class[_], Property](
- classOf[Trial.Status] -> stringProperty(),
- classOf[TrialHistory.Action] -> stringProperty(),
- classOf[TrialHistory.State] -> stringProperty()
- ) ++ customCommonProperties
-
- val customTrialCurationObjectsExamples = immutable.Map[Class[_], JsValue](
- classOf[Trial] -> trialWriter.write(xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextTrial()),
- classOf[Arm] -> armFormat.write(xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextArm()),
- classOf[TrialHistory] -> trialHistoryFormat.write(
- xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextTrialHistory()),
- classOf[TrialIssue] -> trialIssueWriter.write(
- xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextTrialIssue()),
- classOf[RichCriterion] -> richCriterionFormat.write(
- xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextRichCriterion()),
- classOf[InterventionWithArms] -> interventionFormat.write(
- xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextInterventionWithArms()),
- classOf[InterventionType] -> interventionTypeFormat.write(
- xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextInterventionType()),
- classOf[Hypothesis] -> hypothesisFormat.write(
- xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextHypothesis()),
- classOf[StudyDesign] -> studyDesignFormat.write(
- xyz.driver.pdsuidomain.fakes.entities.trialcuration.nextStudyDesign())
- )
+ object trialcuration {
+ import xyz.driver.pdsuidomain.fakes.entities.trialcuration._
+ import xyz.driver.pdsuidomain.fakes.entities.export
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.export._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.arm._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.criterion._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.intervention._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.hypothesis._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.studydesign._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.trial._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.trialhistory._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.trialissue._
+
+ val customTrialCurationProperties = immutable.Map[Class[_], Property](
+ classOf[Trial.Status] -> stringProperty(),
+ classOf[TrialHistory.Action] -> stringProperty(),
+ classOf[TrialHistory.State] -> stringProperty()
+ ) ++ customCommonProperties
+
+ val customTrialCurationObjectsExamples = immutable.Map[Class[_], JsValue](
+ classOf[Trial] -> trialWriter.write(nextTrial()),
+ classOf[Arm] -> armFormat.write(nextArm()),
+ classOf[TrialHistory] -> trialHistoryFormat.write(nextTrialHistory()),
+ classOf[TrialIssue] -> trialIssueWriter.write(nextTrialIssue()),
+ classOf[RichCriterion] -> richCriterionFormat.write(nextRichCriterion()),
+ classOf[InterventionWithArms] -> interventionFormat.write(nextInterventionWithArms()),
+ classOf[InterventionType] -> interventionTypeFormat.write(nextInterventionType()),
+ classOf[Hypothesis] -> hypothesisFormat.write(nextHypothesis()),
+ classOf[StudyDesign] -> studyDesignFormat.write(nextStudyDesign()),
+ classOf[ExportTrialWithLabels] -> trialWithLabelsFormat.write(export.nextExportTrialWithLabels())
+ )
+ }
- // records-processing-service
- object Rep {
+ object recordprocessing {
import xyz.driver.pdsuidomain.fakes.entities.recordprocessing._
- import xyz.driver.pdsuidomain.formats.json.sprayformats._
+ import xyz.driver.pdsuidomain.fakes.entities.export
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.export._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.documentissue._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.documenthistory._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.recordissue._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.recordhistory._
+ import xyz.driver.pdsuidomain.formats.json.sprayformats.extracteddata._
val customRecordProcessingProperties = immutable.Map[Class[_], Property](
classOf[MedicalRecord.Status] -> stringProperty(),
@@ -87,37 +96,15 @@ object CustomSwaggerJsonFormats {
classOf[DocumentHistory.State] -> stringProperty()
) ++ customCommonProperties
- val customRepObjectsExamples = immutable.Map[Class[_], JsValue](
- classOf[Document] ->
- document.documentFormat.write(nextDocument()),
- classOf[DocumentIssue] ->
- documentissue.documentIssueFormat.write(nextDocumentIssue()),
- classOf[DocumentHistory] ->
- documenthistory.documentHistoryFormat.write(nextDocumentHistory()),
- classOf[TextJson[List[MedicalRecord.Meta]]] ->
- record.recordMetaFormat.write(nextMedicalRecordMetaJson()),
- classOf[MedicalRecord] ->
- record.recordFormat.write(nextMedicalRecord()),
- classOf[MedicalRecordIssue] ->
- recordissue.recordIssueFormat.write(nextMedicalRecordIssue()),
- classOf[MedicalRecordHistory] ->
- recordhistory.recordHistoryFormat.write(nextMedicalRecordHistory()),
- classOf[RichExtractedData] ->
- extracteddata.extractedDataFormat.write(nextRichExtractedData()),
- classOf[MedicalRecord.Meta] ->
- record.recordMetaTypeFormat.write(nextMedicalRecordMeta()),
- classOf[TextJson[Document.Meta]] ->
- document.fullDocumentMetaFormat.write(nextDocumentMetaJson()),
- classOf[ExtractedData.Meta] ->
- extracteddata.extractedDataMetaFormat.write(nextExtractedDataMeta()),
- classOf[ExtractedData.Meta.Evidence] ->
- extracteddata.metaEvidenceFormat.write(nextExtractedDataMetaEvidence()),
- classOf[ExtractedData.Meta.Keyword] ->
- extracteddata.metaKeywordFormat.write(nextExtractedDataMetaKeyword()),
- classOf[ExtractedData.Meta.TextLayerPosition] ->
- extracteddata.metaTextLayerPositionFormat.write(nextExtractedDataMetaTextLayerPosition()),
- classOf[TextJson[ExtractedData.Meta]] ->
- extracteddata.fullExtractedDataMetaFormat.write(nextExtractedDataMetaJson())
+ val customRecordProcessingObjectsExamples = immutable.Map[Class[_], JsValue](
+ classOf[Document] -> documentFormat.write(nextDocument()),
+ classOf[DocumentIssue] -> documentIssueFormat.write(nextDocumentIssue()),
+ classOf[DocumentHistory] -> documentHistoryFormat.write(nextDocumentHistory()),
+ classOf[MedicalRecord] -> recordFormat.write(nextMedicalRecord()),
+ classOf[MedicalRecordIssue] -> recordIssueFormat.write(nextMedicalRecordIssue()),
+ classOf[MedicalRecordHistory] -> recordHistoryFormat.write(nextMedicalRecordHistory()),
+ classOf[RichExtractedData] -> extractedDataFormat.write(nextRichExtractedData()),
+ classOf[ExportPatientWithLabels] -> patientWithLabelsFormat.write(export.nextExportPatientWithLabels())
) ++ customCommonObjectsExamples
}
@@ -139,17 +126,32 @@ object CustomSwaggerJsonFormats {
) ++ customCommonProperties
val customTreatmentMatchingObjectsExamples = immutable.Map[Class[_], JsValue](
- classOf[Patient] -> patientWriter.write(nextPatient()),
- classOf[RichPatientLabel] -> richPatientLabelWriter.write(nextRichPatientLabel()),
- classOf[PatientLabel] -> patientLabelDefiningCriteriaWriter.write(nextPatientLabel()),
- classOf[RichPatientCriterion] -> patientCriterionWriter.write(nextRichPatientCriterion()),
- classOf[DraftPatientCriterion] -> draftPatientCriterionFormat.write(nextDraftPatientCriterion()),
- classOf[PatientLabelEvidenceView] -> patientLabelEvidenceWriter.write(nextPatientLabelEvidenceView()),
- classOf[RichPatientEligibleTrial] -> patientEligibleTrialWriter.write(nextRichPatientEligibleTrial()),
- classOf[PatientHypothesis] -> patientHypothesisWriter.write(nextPatientHypothesis()),
- classOf[RichPatientHypothesis] -> richPatientHypothesisWriter.write(nextRichPatientHypothesis()),
- classOf[PatientHistory] -> patientHistoryFormat.write(nextPatientHistory()),
- classOf[PatientIssue] -> patientIssueWriter.write(nextPatientIssue())
+ classOf[Patient] -> patientWriter.write(nextPatient()),
+ classOf[RichPatientLabel] -> richPatientLabelWriter.write(nextRichPatientLabel()),
+ classOf[PatientLabel] -> patientLabelDefiningCriteriaWriter.write(nextPatientLabel()),
+ classOf[RichPatientCriterion] -> patientCriterionWriter.write(nextRichPatientCriterion()),
+ classOf[DraftPatientCriterion] -> draftPatientCriterionFormat.write(nextDraftPatientCriterion()),
+ classOf[PatientLabelEvidenceView] -> patientLabelEvidenceWriter.write(nextPatientLabelEvidenceView()),
+ classOf[RichPatientEligibleTrial] -> patientEligibleTrialWriter.write(nextRichPatientEligibleTrial()),
+ classOf[PatientHypothesis] -> patientHypothesisWriter.write(nextPatientHypothesis()),
+ classOf[RichPatientHypothesis] -> richPatientHypothesisWriter.write(nextRichPatientHypothesis()),
+ classOf[PatientHistory] -> patientHistoryFormat.write(nextPatientHistory()),
+ classOf[PatientIssue] -> patientIssueWriter.write(nextPatientIssue()),
+ classOf[ListResponse[Patient]] -> listResponseWriter[Patient].write(nextPatientListResponse()),
+ classOf[ListResponse[PatientLabel]] -> listResponseWriter[PatientLabel].write(nextPatientLabelListResponse()),
+ classOf[ListResponse[RichPatientLabel]] -> listResponseWriter[RichPatientLabel].write(
+ nextRichPatientLabelListResponse()),
+ classOf[ListResponse[RichPatientCriterion]] -> listResponseWriter[RichPatientCriterion].write(
+ nextRichPatientCriterionListResponse()),
+ classOf[ListResponse[PatientLabelEvidenceView]] -> listResponseWriter[PatientLabelEvidenceView].write(
+ nextPatientLabelEvidenceViewListResponse()),
+ classOf[ListResponse[RichPatientEligibleTrial]] -> listResponseWriter[RichPatientEligibleTrial].write(
+ nextRichPatientEligibleTrialListResponse()),
+ classOf[ListResponse[RichPatientHypothesis]] -> listResponseWriter[RichPatientHypothesis].write(
+ nextRichPatientHypothesisListResponse()),
+ classOf[ListResponse[PatientIssue]] -> listResponseWriter[PatientIssue].write(nextPatientIssuesListResponse()),
+ classOf[ListResponse[PatientHistory]] -> listResponseWriter[PatientHistory].write(
+ nextPatientHistoryListResponse())
) ++ customCommonObjectsExamples
}