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authorvlad <vlad@driver.xyz>2017-10-09 12:24:59 -0700
committervlad <vlad@driver.xyz>2017-10-09 12:24:59 -0700
commit7d8712a62d30b412717e1b730c0ad267cd207aa4 (patch)
tree76662e1b233943c1c840a658682aac9766aa64d7 /src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats
parent52b5e1a5febc91aa316565fdea309df2b646481e (diff)
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Getting rid of the FuzzyValues, Name as a string, and condition
Diffstat (limited to 'src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats')
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/common.scala10
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/export.scala1
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/extracteddata.scala7
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patient.scala4
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientcriterion.scala7
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientdefiningcriteria.scala1
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patienteligibletrial.scala1
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientlabel.scala7
8 files changed, 19 insertions, 19 deletions
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/common.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/common.scala
index dbd0a43..61e0e7f 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/common.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/common.scala
@@ -3,7 +3,7 @@ package xyz.driver.pdsuidomain.formats.json.sprayformats
import java.time.{LocalDate, LocalDateTime, ZoneId, ZonedDateTime}
import spray.json._
-import xyz.driver.pdsuicommon.domain.{FuzzyValue, LongId, StringId, UuidId}
+import xyz.driver.pdsuicommon.domain.{LongId, StringId, UuidId}
object common {
@@ -55,14 +55,6 @@ object common {
}
}
- implicit def fuzzyValueFormat: RootJsonFormat[FuzzyValue] = new RootJsonFormat[FuzzyValue] {
- override def write(value: FuzzyValue): JsString = JsString(FuzzyValue.valueToString(value))
- override def read(json: JsValue): FuzzyValue = json match {
- case JsString(value) => FuzzyValue.fromString(value)
- case _ => deserializationError(s"Expected value as FuzzyValue, but got $json")
- }
- }
-
implicit val integerFormat: RootJsonFormat[Integer] = new RootJsonFormat[Integer] {
override def write(obj: Integer): JsNumber = JsNumber(obj.intValue())
override def read(json: JsValue): Integer = json match {
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/export.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/export.scala
index 39d5c59..85d614d 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/export.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/export.scala
@@ -5,6 +5,7 @@ import xyz.driver.entities.labels.Label
import xyz.driver.pdsuidomain.entities.{Arm, Criterion}
import xyz.driver.pdsuidomain.entities.export.patient._
import xyz.driver.pdsuidomain.entities.export.trial.{ExportTrialArm, ExportTrialLabelCriterion, ExportTrialWithLabels}
+import xyz.driver.formats.json.labels._
object export {
import DefaultJsonProtocol._
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/extracteddata.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/extracteddata.scala
index d6eadbd..5d5585a 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/extracteddata.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/extracteddata.scala
@@ -1,10 +1,11 @@
package xyz.driver.pdsuidomain.formats.json.sprayformats
import spray.json._
-import xyz.driver.entities.labels.{Label, LabelCategory}
-import xyz.driver.pdsuicommon.domain.{FuzzyValue, LongId, TextJson}
+import xyz.driver.entities.labels.{Label, LabelCategory, LabelValue}
+import xyz.driver.pdsuicommon.domain.{LongId, TextJson}
import xyz.driver.pdsuidomain.entities._
import xyz.driver.pdsuidomain.services.ExtractedDataService.RichExtractedData
+import xyz.driver.formats.json.labels._
object extracteddata {
import DefaultJsonProtocol._
@@ -44,7 +45,7 @@ object extracteddata {
val value = fields
.get("value")
- .map(_.convertTo[FuzzyValue])
+ .map(_.convertTo[LabelValue])
ExtractedDataLabel(
id = LongId(0),
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patient.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patient.scala
index 95c0674..3da76c1 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patient.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patient.scala
@@ -3,6 +3,8 @@ package xyz.driver.pdsuidomain.formats.json.sprayformats
import spray.json._
import xyz.driver.core.json.EnumJsonFormat
import xyz.driver.pdsuidomain.entities._
+import xyz.driver.formats.json.common._
+import xyz.driver.formats.json.patient._
object patient {
import DefaultJsonProtocol._
@@ -38,7 +40,7 @@ object patient {
"previousAssignee" -> patient.previousAssignee.toJson,
"lastActiveUser" -> patient.lastActiveUserId.toJson,
"lastUpdate" -> patient.lastUpdate.toJson,
- "condition" -> patient.condition.toJson,
+ "condition" -> patient.cancerType.toJson,
"orderId" -> patient.orderId.toJson
)
}
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientcriterion.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientcriterion.scala
index affb346..7e8c220 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientcriterion.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientcriterion.scala
@@ -1,9 +1,10 @@
package xyz.driver.pdsuidomain.formats.json.sprayformats
import spray.json._
-import xyz.driver.pdsuicommon.domain.FuzzyValue
+import xyz.driver.entities.labels.LabelValue
import xyz.driver.pdsuidomain.entities._
import xyz.driver.pdsuidomain.services.PatientCriterionService.{DraftPatientCriterion, RichPatientCriterion}
+import xyz.driver.formats.json.labels._
object patientcriterion {
import DefaultJsonProtocol._
@@ -14,13 +15,13 @@ object patientcriterion {
val eligibilityStatus = if (fields.contains("eligibilityStatus")) {
fields
.get("eligibilityStatus")
- .map(_.convertTo[FuzzyValue])
+ .map(_.convertTo[LabelValue])
} else orig.eligibilityStatus
val verifiedEligibilityStatus = if (fields.contains("verifiedEligibilityStatus")) {
fields
.get("verifiedEligibilityStatus")
- .map(_.convertTo[FuzzyValue])
+ .map(_.convertTo[LabelValue])
} else orig.verifiedEligibilityStatus
orig.copy(
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientdefiningcriteria.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientdefiningcriteria.scala
index 0520ef2..746c7b4 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientdefiningcriteria.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientdefiningcriteria.scala
@@ -2,6 +2,7 @@ package xyz.driver.pdsuidomain.formats.json.sprayformats
import spray.json._
import xyz.driver.pdsuidomain.entities.PatientLabel
+import xyz.driver.formats.json.labels._
object patientdefiningcriteria {
import DefaultJsonProtocol._
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patienteligibletrial.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patienteligibletrial.scala
index 041d9da..342d3a8 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patienteligibletrial.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patienteligibletrial.scala
@@ -3,6 +3,7 @@ package xyz.driver.pdsuidomain.formats.json.sprayformats
import spray.json._
import xyz.driver.pdsuidomain.entities._
import xyz.driver.pdsuidomain.services.PatientEligibleTrialService.RichPatientEligibleTrial
+import xyz.driver.formats.json.labels._
object patienteligibletrial {
import DefaultJsonProtocol._
diff --git a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientlabel.scala b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientlabel.scala
index b36949e..ff6d24d 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientlabel.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/formats/json/sprayformats/patientlabel.scala
@@ -1,9 +1,10 @@
package xyz.driver.pdsuidomain.formats.json.sprayformats
import spray.json._
-import xyz.driver.pdsuicommon.domain.FuzzyValue
+import xyz.driver.entities.labels.LabelValue
import xyz.driver.pdsuidomain.entities._
import xyz.driver.pdsuidomain.services.PatientLabelService.RichPatientLabel
+import xyz.driver.formats.json.labels._
object patientlabel {
import DefaultJsonProtocol._
@@ -13,12 +14,12 @@ object patientlabel {
case JsObject(fields) =>
val primaryValue = fields
.get("primaryValue")
- .map(_.convertTo[Option[FuzzyValue]])
+ .map(_.convertTo[Option[LabelValue]])
.getOrElse(orig.primaryValue)
val verifiedPrimaryValue = fields
.get("verifiedPrimaryValue")
- .map(_.convertTo[Option[FuzzyValue]])
+ .map(_.convertTo[Option[LabelValue]])
.getOrElse(orig.verifiedPrimaryValue)
orig.copy(