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-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/services/CriterionService.scala4
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/services/EligibilityArmService.scala139
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/services/SlotArmService.scala125
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/services/fake/FakeTrialService.scala11
4 files changed, 272 insertions, 7 deletions
diff --git a/src/main/scala/xyz/driver/pdsuidomain/services/CriterionService.scala b/src/main/scala/xyz/driver/pdsuidomain/services/CriterionService.scala
index fd9268b..7dbf0d9 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/services/CriterionService.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/services/CriterionService.scala
@@ -21,7 +21,9 @@ object CriterionService {
def userMessage: String = "Access denied"
}
- final case class RichCriterion(criterion: Criterion, armIds: Seq[LongId[Arm]], labels: Seq[CriterionLabel])
+ final case class RichCriterion(criterion: Criterion,
+ armIds: Seq[LongId[EligibilityArm]],
+ labels: Seq[CriterionLabel])
object RichCriterion {
implicit def toPhiString(x: RichCriterion): PhiString = {
import x._
diff --git a/src/main/scala/xyz/driver/pdsuidomain/services/EligibilityArmService.scala b/src/main/scala/xyz/driver/pdsuidomain/services/EligibilityArmService.scala
new file mode 100644
index 0000000..1e0f65e
--- /dev/null
+++ b/src/main/scala/xyz/driver/pdsuidomain/services/EligibilityArmService.scala
@@ -0,0 +1,139 @@
+package xyz.driver.pdsuidomain.services
+
+import xyz.driver.pdsuicommon.auth.AuthenticatedRequestContext
+import xyz.driver.pdsuicommon.db._
+import xyz.driver.pdsuicommon.domain.LongId
+import xyz.driver.pdsuicommon.error.DomainError
+import xyz.driver.pdsuicommon.logging._
+import xyz.driver.pdsuidomain.entities.{EligibilityArm, EligibilityArmWithDiseases, SlotArm}
+
+import scala.concurrent.Future
+
+object EligibilityArmService {
+
+ trait DefaultAccessDeniedError {
+ def userMessage: String = "Access denied"
+ }
+
+ trait DefaultNotFoundError {
+ def userMessage: String = "EligibilityArm not found"
+ }
+
+ trait SlotArmNotFoundError {
+ def userMessage: String = "SlotArm not found"
+ }
+
+ sealed trait GetByIdReply
+ object GetByIdReply {
+
+ final case class Entity(x: EligibilityArmWithDiseases) extends GetByIdReply
+
+ type Error = GetByIdReply with DomainError
+
+ case object NotFoundError extends GetByIdReply with DefaultNotFoundError with DomainError.NotFoundError
+
+ case object AuthorizationError
+ extends GetByIdReply with DomainError.AuthorizationError with DefaultAccessDeniedError
+
+ final case class CommonError(userMessage: String)(implicit requestContext: AuthenticatedRequestContext)
+ extends GetByIdReply with DomainError
+ }
+
+ sealed trait GetListReply
+ object GetListReply {
+ type Error = GetListReply with DomainError
+
+ final case class EntityList(xs: Seq[EligibilityArmWithDiseases], totalFound: Int) extends GetListReply
+
+ case object AuthorizationError
+ extends GetListReply with DomainError.AuthorizationError with DefaultAccessDeniedError
+ }
+
+ sealed trait UpdateReply
+ object UpdateReply {
+
+ final case class Updated(updated: EligibilityArmWithDiseases) extends UpdateReply
+
+ type Error = UpdateReply with DomainError
+
+ case object NotFoundError extends UpdateReply with DefaultNotFoundError with DomainError.NotFoundError
+
+ case object AuthorizationError
+ extends UpdateReply with DefaultAccessDeniedError with DomainError.AuthorizationError
+
+ final case class CommonError(userMessage: String) extends UpdateReply with DomainError
+
+ final case class AlreadyExistsError(x: EligibilityArmWithDiseases) extends UpdateReply with DomainError {
+ val userMessage = s"The arm with such name of trial already exists."
+ }
+
+ implicit def toPhiString(reply: UpdateReply): PhiString = reply match {
+ case Updated(x) => phi"Updated($x)"
+ case x: Error => DomainError.toPhiString(x)
+ }
+ }
+
+ sealed trait CreateReply
+ object CreateReply {
+ final case class Created(x: EligibilityArmWithDiseases) extends CreateReply
+
+ type Error = CreateReply with DomainError
+
+ case object AuthorizationError
+ extends CreateReply with DefaultAccessDeniedError with DomainError.AuthorizationError
+
+ case object NotFoundError extends CreateReply with SlotArmNotFoundError with DomainError.NotFoundError
+
+ final case class CommonError(userMessage: String) extends CreateReply with DomainError
+
+ final case class AlreadyExistsError(x: EligibilityArmWithDiseases) extends CreateReply with DomainError {
+ val userMessage = s"The arm with this name of trial already exists."
+ }
+
+ implicit def toPhiString(reply: CreateReply): PhiString = reply match {
+ case Created(x) => phi"Created($x)"
+ case x: Error => DomainError.toPhiString(x)
+ }
+ }
+
+ sealed trait DeleteReply
+ object DeleteReply {
+ case object Deleted extends DeleteReply
+
+ type Error = DeleteReply with DomainError
+
+ case object NotFoundError extends DeleteReply with DefaultNotFoundError with DomainError.NotFoundError
+
+ case object AuthorizationError
+ extends DeleteReply with DefaultAccessDeniedError with DomainError.AuthorizationError
+
+ final case class CommonError(userMessage: String) extends DeleteReply with DomainError
+ }
+}
+
+trait EligibilityArmService {
+
+ import EligibilityArmService._
+
+ def getAll(filter: SearchFilterExpr = SearchFilterExpr.Empty,
+ sorting: Option[Sorting] = None,
+ pagination: Option[Pagination] = None)(
+ implicit requestContext: AuthenticatedRequestContext): Future[GetListReply]
+
+ def getByEligibilityId(armId: LongId[EligibilityArm])(
+ implicit requestContext: AuthenticatedRequestContext): Future[GetByIdReply]
+
+ def getBySlotId(armId: LongId[SlotArm],
+ filter: SearchFilterExpr = SearchFilterExpr.Empty,
+ sorting: Option[Sorting] = None,
+ pagination: Option[Pagination] = None)(
+ implicit requestContext: AuthenticatedRequestContext): Future[GetListReply]
+
+ def create(slotArmId: LongId[SlotArm], draftEligibilityArm: EligibilityArmWithDiseases)(
+ implicit requestContext: AuthenticatedRequestContext): Future[CreateReply]
+
+ def update(origEligibilityArm: EligibilityArmWithDiseases, draftEligibilityArm: EligibilityArmWithDiseases)(
+ implicit requestContext: AuthenticatedRequestContext): Future[UpdateReply]
+
+ def delete(id: LongId[EligibilityArm])(implicit requestContext: AuthenticatedRequestContext): Future[DeleteReply]
+}
diff --git a/src/main/scala/xyz/driver/pdsuidomain/services/SlotArmService.scala b/src/main/scala/xyz/driver/pdsuidomain/services/SlotArmService.scala
new file mode 100644
index 0000000..af7084b
--- /dev/null
+++ b/src/main/scala/xyz/driver/pdsuidomain/services/SlotArmService.scala
@@ -0,0 +1,125 @@
+package xyz.driver.pdsuidomain.services
+
+import xyz.driver.pdsuicommon.auth.AuthenticatedRequestContext
+import xyz.driver.pdsuicommon.db._
+import xyz.driver.pdsuicommon.domain.LongId
+import xyz.driver.pdsuicommon.error.DomainError
+import xyz.driver.pdsuicommon.logging._
+import xyz.driver.pdsuidomain.entities.SlotArm
+
+import scala.concurrent.Future
+
+object SlotArmService {
+
+ trait DefaultAccessDeniedError {
+ def userMessage: String = "Access denied"
+ }
+
+ trait DefaultNotFoundError {
+ def userMessage: String = "SlotArm not found"
+ }
+
+ sealed trait GetByIdReply
+ object GetByIdReply {
+
+ final case class Entity(x: SlotArm) extends GetByIdReply
+
+ type Error = GetByIdReply with DomainError
+
+ case object NotFoundError extends GetByIdReply with DefaultNotFoundError with DomainError.NotFoundError
+
+ case object AuthorizationError
+ extends GetByIdReply with DomainError.AuthorizationError with DefaultAccessDeniedError
+
+ final case class CommonError(userMessage: String)(implicit requestContext: AuthenticatedRequestContext)
+ extends GetByIdReply with DomainError
+ }
+
+ sealed trait GetListReply
+ object GetListReply {
+ type Error = GetListReply with DomainError
+
+ final case class EntityList(xs: Seq[SlotArm], totalFound: Int) extends GetListReply
+
+ case object AuthorizationError
+ extends GetListReply with DomainError.AuthorizationError with DefaultAccessDeniedError
+ }
+
+ sealed trait UpdateReply
+ object UpdateReply {
+
+ final case class Updated(updated: SlotArm) extends UpdateReply
+
+ type Error = UpdateReply with DomainError
+
+ case object NotFoundError extends UpdateReply with DefaultNotFoundError with DomainError.NotFoundError
+
+ case object AuthorizationError
+ extends UpdateReply with DefaultAccessDeniedError with DomainError.AuthorizationError
+
+ final case class CommonError(userMessage: String) extends UpdateReply with DomainError
+
+ final case class AlreadyExistsError(x: SlotArm) extends UpdateReply with DomainError {
+ val userMessage = s"The arm with such name of trial already exists."
+ }
+
+ implicit def toPhiString(reply: UpdateReply): PhiString = reply match {
+ case Updated(x) => phi"Updated($x)"
+ case x: Error => DomainError.toPhiString(x)
+ }
+ }
+
+ sealed trait CreateReply
+ object CreateReply {
+ final case class Created(x: SlotArm) extends CreateReply
+
+ type Error = CreateReply with DomainError
+
+ case object AuthorizationError
+ extends CreateReply with DefaultAccessDeniedError with DomainError.AuthorizationError
+
+ final case class CommonError(userMessage: String) extends CreateReply with DomainError
+
+ final case class AlreadyExistsError(x: SlotArm) extends CreateReply with DomainError {
+ val userMessage = s"The arm with this name of trial already exists."
+ }
+
+ implicit def toPhiString(reply: CreateReply): PhiString = reply match {
+ case Created(x) => phi"Created($x)"
+ case x: Error => DomainError.toPhiString(x)
+ }
+ }
+
+ sealed trait DeleteReply
+ object DeleteReply {
+ case object Deleted extends DeleteReply
+
+ type Error = DeleteReply with DomainError
+
+ case object NotFoundError extends DeleteReply with DefaultNotFoundError with DomainError.NotFoundError
+
+ case object AuthorizationError
+ extends DeleteReply with DefaultAccessDeniedError with DomainError.AuthorizationError
+
+ final case class CommonError(userMessage: String) extends DeleteReply with DomainError
+ }
+}
+
+trait SlotArmService {
+
+ import SlotArmService._
+
+ def getAll(filter: SearchFilterExpr = SearchFilterExpr.Empty,
+ sorting: Option[Sorting] = None,
+ pagination: Option[Pagination] = None)(
+ implicit requestContext: AuthenticatedRequestContext): Future[GetListReply]
+
+ def getById(armId: LongId[SlotArm])(implicit requestContext: AuthenticatedRequestContext): Future[GetByIdReply]
+
+ def create(draftSlotArm: SlotArm)(implicit requestContext: AuthenticatedRequestContext): Future[CreateReply]
+
+ def update(origSlotArm: SlotArm, draftSlotArm: SlotArm)(
+ implicit requestContext: AuthenticatedRequestContext): Future[UpdateReply]
+
+ def delete(id: LongId[SlotArm])(implicit requestContext: AuthenticatedRequestContext): Future[DeleteReply]
+}
diff --git a/src/main/scala/xyz/driver/pdsuidomain/services/fake/FakeTrialService.scala b/src/main/scala/xyz/driver/pdsuidomain/services/fake/FakeTrialService.scala
index a1efdac..e0efcd1 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/services/fake/FakeTrialService.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/services/fake/FakeTrialService.scala
@@ -11,8 +11,8 @@ import xyz.driver.entities.patient.CancerType
import xyz.driver.pdsuicommon.auth.AuthenticatedRequestContext
import xyz.driver.pdsuicommon.db._
import xyz.driver.pdsuicommon.domain.{LongId, StringId, UuidId}
-import xyz.driver.pdsuidomain.entities.{Arm, Criterion, Trial}
import xyz.driver.pdsuidomain.entities.export.trial.{ExportTrialArm, ExportTrialLabelCriterion, ExportTrialWithLabels}
+import xyz.driver.pdsuidomain.entities.{Criterion, EligibilityArm, Trial}
import xyz.driver.pdsuidomain.services.TrialService
import scala.concurrent.Future
@@ -30,7 +30,6 @@ class FakeTrialService extends TrialService {
previousAssignee = None,
lastActiveUserId = None,
lastUpdate = LocalDateTime.now(),
- disease = CancerType.Breast,
phase = "",
hypothesisId = None,
studyDesignId = None,
@@ -70,20 +69,20 @@ class FakeTrialService extends TrialService {
ExportTrialWithLabels(
StringId[Trial]("NCT" + generators.nextInt(999999).toString),
UuidId[Trial](generators.nextUuid()),
- generators.oneOf("adenocarcinoma", "breast", "prostate"),
LocalDateTime.now(),
labelVersion = 1L,
generators.listOf(
new ExportTrialArm(
- LongId[Arm](generators.nextInt(999999).toLong),
- generators.nextName().value
+ LongId[EligibilityArm](generators.nextInt(999999).toLong),
+ generators.nextName().value,
+ generators.listOf(generators.oneOf("adenocarcinoma", "breast", "prostate"))
)),
generators.listOf(
new ExportTrialLabelCriterion(
LongId[Criterion](generators.nextInt(999999).toLong),
generators.nextOption(generators.nextBoolean()),
LongId[Label](generators.nextInt(999999).toLong),
- generators.setOf(LongId[Arm](generators.nextInt(999999).toLong)),
+ generators.setOf(LongId[EligibilityArm](generators.nextInt(999999).toLong)),
generators.nextName().value,
generators.nextBoolean(),
generators.nextBoolean()