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-rw-r--r--src/main/scala/NamespacedCodegen.scala19
1 files changed, 2 insertions, 17 deletions
diff --git a/src/main/scala/NamespacedCodegen.scala b/src/main/scala/NamespacedCodegen.scala
index b853e9a..220f4f2 100644
--- a/src/main/scala/NamespacedCodegen.scala
+++ b/src/main/scala/NamespacedCodegen.scala
@@ -41,22 +41,6 @@ object NamespacedCodegen {
.get(t.name.schema.getOrElse(""))
.fold(false)(ts => ts.isEmpty || ts.contains(t.name.name))))))
- val manualForeignKeys: Map[(String, String), (String, String)] =
- Map(
- ("portal.case_tumor_info", "patient_id") -> (("patients.patients", "patient_id")),
- ("portal.case_tumor_info", "case_id") -> (("work_queues.reports", "case_id")),
- ("portal.case_tumor_info", "cancer_id") -> (("patients.cancer", "cancer_id")),
- ("confidential.join_pat", "patient_id") -> (("patients.patients", "patient_id")),
- ("portal.case_tumor_info", "ordering_physician") -> (("patients.oncologists", "oncologist_id")),
- ("patients.oncologists_case_permissions_view", "oncologist_id") -> (("patients.oncologists", "oncologist_id")),
- ("patients.oncologists_case_permissions_view", "case_id") -> (("work_queues.reports", "case_id")),
- ("case_accessioning.case_accessioning", "case_id") -> (("work_queues.reports", "case_id")),
- ("case_accessioning.case_accessioning", "cancer_id") -> (("patients.cancer", "cancer_id")),
- ("experiments.somatic_snvs_indels_filtered", "cancer_id") -> (("patients.cancer", "cancer_id")),
- ("experiments.experiments", "case_id") -> (("work_queues.reports", "case_id")),
- ("samples.samples", "case_id") -> (("work_queues.reports", "case_id")) // TODO: Several of these can be added in a PR on postgres.
- )
-
def references(dbModel: Model, tcMappings: Map[(String, String), (String, String)]): Map[(String, String), (Table, Column)] = {
def getTableColumn(tc: (String, String)) : (Table, Column) = {
val (tableName, columnName) = tc
@@ -80,7 +64,8 @@ object NamespacedCodegen {
pkg: String,
filename: String,
typesFilename: String,
- schemaTableNames: List[String]
+ schemaTableNames: List[String],
+ manualForeignKeys: Map[(String, String), (String, String)]
): Unit = {
val dc = DatabaseConfig.forURI[JdbcProfile](uri)
val slickDriver = if(dc.driverIsObject) dc.driverName else "new " + dc.driverName