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author | Josh Rosen <joshrosen@eecs.berkeley.edu> | 2012-08-19 17:12:51 -0700 |
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committer | Josh Rosen <joshrosen@eecs.berkeley.edu> | 2012-08-19 17:17:42 -0700 |
commit | 13b9514966a423f80f672f23f42ec3f0113936fd (patch) | |
tree | c32506f2349a3168f7a51cf413a71577c7c72f40 /pyspark/pyspark/cloudpickle.py | |
parent | 886b39de557b4d5f54f5ca11559fca9799534280 (diff) | |
download | spark-13b9514966a423f80f672f23f42ec3f0113936fd.tar.gz spark-13b9514966a423f80f672f23f42ec3f0113936fd.tar.bz2 spark-13b9514966a423f80f672f23f42ec3f0113936fd.zip |
Bundle cloudpickle with pyspark.
Diffstat (limited to 'pyspark/pyspark/cloudpickle.py')
-rw-r--r-- | pyspark/pyspark/cloudpickle.py | 974 |
1 files changed, 974 insertions, 0 deletions
diff --git a/pyspark/pyspark/cloudpickle.py b/pyspark/pyspark/cloudpickle.py new file mode 100644 index 0000000000..6a7c23a069 --- /dev/null +++ b/pyspark/pyspark/cloudpickle.py @@ -0,0 +1,974 @@ +""" +This class is defined to override standard pickle functionality + +The goals of it follow: +-Serialize lambdas and nested functions to compiled byte code +-Deal with main module correctly +-Deal with other non-serializable objects + +It does not include an unpickler, as standard python unpickling suffices. + +This module was extracted from the `cloud` package, developed by `PiCloud, Inc. +<http://www.picloud.com>`_. + +Copyright (c) 2012, Regents of the University of California. +Copyright (c) 2009 `PiCloud, Inc. <http://www.picloud.com>`_. +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions +are met: + * Redistributions of source code must retain the above copyright + notice, this list of conditions and the following disclaimer. + * Redistributions in binary form must reproduce the above copyright + notice, this list of conditions and the following disclaimer in the + documentation and/or other materials provided with the distribution. + * Neither the name of the University of California, Berkeley nor the + names of its contributors may be used to endorse or promote + products derived from this software without specific prior written + permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS +"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT +LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR +A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT +HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, +SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED +TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR +PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF +LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING +NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS +SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +""" + + +import operator +import os +import pickle +import struct +import sys +import types +from functools import partial +import itertools +from copy_reg import _extension_registry, _inverted_registry, _extension_cache +import new +import dis +import traceback + +#relevant opcodes +STORE_GLOBAL = chr(dis.opname.index('STORE_GLOBAL')) +DELETE_GLOBAL = chr(dis.opname.index('DELETE_GLOBAL')) +LOAD_GLOBAL = chr(dis.opname.index('LOAD_GLOBAL')) +GLOBAL_OPS = [STORE_GLOBAL, DELETE_GLOBAL, LOAD_GLOBAL] + +HAVE_ARGUMENT = chr(dis.HAVE_ARGUMENT) +EXTENDED_ARG = chr(dis.EXTENDED_ARG) + +import logging +cloudLog = logging.getLogger("Cloud.Transport") + +try: + import ctypes +except (MemoryError, ImportError): + logging.warning('Exception raised on importing ctypes. Likely python bug.. some functionality will be disabled', exc_info = True) + ctypes = None + PyObject_HEAD = None +else: + + # for reading internal structures + PyObject_HEAD = [ + ('ob_refcnt', ctypes.c_size_t), + ('ob_type', ctypes.c_void_p), + ] + + +try: + from cStringIO import StringIO +except ImportError: + from StringIO import StringIO + +# These helper functions were copied from PiCloud's util module. +def islambda(func): + return getattr(func,'func_name') == '<lambda>' + +def xrange_params(xrangeobj): + """Returns a 3 element tuple describing the xrange start, step, and len + respectively + + Note: Only guarentees that elements of xrange are the same. parameters may + be different. + e.g. xrange(1,1) is interpretted as xrange(0,0); both behave the same + though w/ iteration + """ + + xrange_len = len(xrangeobj) + if not xrange_len: #empty + return (0,1,0) + start = xrangeobj[0] + if xrange_len == 1: #one element + return start, 1, 1 + return (start, xrangeobj[1] - xrangeobj[0], xrange_len) + +#debug variables intended for developer use: +printSerialization = False +printMemoization = False + +useForcedImports = True #Should I use forced imports for tracking? + + + +class CloudPickler(pickle.Pickler): + + dispatch = pickle.Pickler.dispatch.copy() + savedForceImports = False + savedDjangoEnv = False #hack tro transport django environment + + def __init__(self, file, protocol=None, min_size_to_save= 0): + pickle.Pickler.__init__(self,file,protocol) + self.modules = set() #set of modules needed to depickle + self.globals_ref = {} # map ids to dictionary. used to ensure that functions can share global env + + def dump(self, obj): + # note: not thread safe + # minimal side-effects, so not fixing + recurse_limit = 3000 + base_recurse = sys.getrecursionlimit() + if base_recurse < recurse_limit: + sys.setrecursionlimit(recurse_limit) + self.inject_addons() + try: + return pickle.Pickler.dump(self, obj) + except RuntimeError, e: + if 'recursion' in e.args[0]: + msg = """Could not pickle object as excessively deep recursion required. + Try _fast_serialization=2 or contact PiCloud support""" + raise pickle.PicklingError(msg) + finally: + new_recurse = sys.getrecursionlimit() + if new_recurse == recurse_limit: + sys.setrecursionlimit(base_recurse) + + def save_buffer(self, obj): + """Fallback to save_string""" + pickle.Pickler.save_string(self,str(obj)) + dispatch[buffer] = save_buffer + + #block broken objects + def save_unsupported(self, obj, pack=None): + raise pickle.PicklingError("Cannot pickle objects of type %s" % type(obj)) + dispatch[types.GeneratorType] = save_unsupported + + #python2.6+ supports slice pickling. some py2.5 extensions might as well. We just test it + try: + slice(0,1).__reduce__() + except TypeError: #can't pickle - + dispatch[slice] = save_unsupported + + #itertools objects do not pickle! + for v in itertools.__dict__.values(): + if type(v) is type: + dispatch[v] = save_unsupported + + + def save_dict(self, obj): + """hack fix + If the dict is a global, deal with it in a special way + """ + #print 'saving', obj + if obj is __builtins__: + self.save_reduce(_get_module_builtins, (), obj=obj) + else: + pickle.Pickler.save_dict(self, obj) + dispatch[pickle.DictionaryType] = save_dict + + + def save_module(self, obj, pack=struct.pack): + """ + Save a module as an import + """ + #print 'try save import', obj.__name__ + self.modules.add(obj) + self.save_reduce(subimport,(obj.__name__,), obj=obj) + dispatch[types.ModuleType] = save_module #new type + + def save_codeobject(self, obj, pack=struct.pack): + """ + Save a code object + """ + #print 'try to save codeobj: ', obj + args = ( + obj.co_argcount, obj.co_nlocals, obj.co_stacksize, obj.co_flags, obj.co_code, + obj.co_consts, obj.co_names, obj.co_varnames, obj.co_filename, obj.co_name, + obj.co_firstlineno, obj.co_lnotab, obj.co_freevars, obj.co_cellvars + ) + self.save_reduce(types.CodeType, args, obj=obj) + dispatch[types.CodeType] = save_codeobject #new type + + def save_function(self, obj, name=None, pack=struct.pack): + """ Registered with the dispatch to handle all function types. + + Determines what kind of function obj is (e.g. lambda, defined at + interactive prompt, etc) and handles the pickling appropriately. + """ + write = self.write + + name = obj.__name__ + modname = pickle.whichmodule(obj, name) + #print 'which gives %s %s %s' % (modname, obj, name) + try: + themodule = sys.modules[modname] + except KeyError: # eval'd items such as namedtuple give invalid items for their function __module__ + modname = '__main__' + + if modname == '__main__': + themodule = None + + if themodule: + self.modules.add(themodule) + + if not self.savedDjangoEnv: + #hack for django - if we detect the settings module, we transport it + django_settings = os.environ.get('DJANGO_SETTINGS_MODULE', '') + if django_settings: + django_mod = sys.modules.get(django_settings) + if django_mod: + cloudLog.debug('Transporting django settings %s during save of %s', django_mod, name) + self.savedDjangoEnv = True + self.modules.add(django_mod) + write(pickle.MARK) + self.save_reduce(django_settings_load, (django_mod.__name__,), obj=django_mod) + write(pickle.POP_MARK) + + + # if func is lambda, def'ed at prompt, is in main, or is nested, then + # we'll pickle the actual function object rather than simply saving a + # reference (as is done in default pickler), via save_function_tuple. + if islambda(obj) or obj.func_code.co_filename == '<stdin>' or themodule == None: + #Force server to import modules that have been imported in main + modList = None + if themodule == None and not self.savedForceImports: + mainmod = sys.modules['__main__'] + if useForcedImports and hasattr(mainmod,'___pyc_forcedImports__'): + modList = list(mainmod.___pyc_forcedImports__) + self.savedForceImports = True + self.save_function_tuple(obj, modList) + return + else: # func is nested + klass = getattr(themodule, name, None) + if klass is None or klass is not obj: + self.save_function_tuple(obj, [themodule]) + return + + if obj.__dict__: + # essentially save_reduce, but workaround needed to avoid recursion + self.save(_restore_attr) + write(pickle.MARK + pickle.GLOBAL + modname + '\n' + name + '\n') + self.memoize(obj) + self.save(obj.__dict__) + write(pickle.TUPLE + pickle.REDUCE) + else: + write(pickle.GLOBAL + modname + '\n' + name + '\n') + self.memoize(obj) + dispatch[types.FunctionType] = save_function + + def save_function_tuple(self, func, forced_imports): + """ Pickles an actual func object. + + A func comprises: code, globals, defaults, closure, and dict. We + extract and save these, injecting reducing functions at certain points + to recreate the func object. Keep in mind that some of these pieces + can contain a ref to the func itself. Thus, a naive save on these + pieces could trigger an infinite loop of save's. To get around that, + we first create a skeleton func object using just the code (this is + safe, since this won't contain a ref to the func), and memoize it as + soon as it's created. The other stuff can then be filled in later. + """ + save = self.save + write = self.write + + # save the modules (if any) + if forced_imports: + write(pickle.MARK) + save(_modules_to_main) + #print 'forced imports are', forced_imports + + forced_names = map(lambda m: m.__name__, forced_imports) + save((forced_names,)) + + #save((forced_imports,)) + write(pickle.REDUCE) + write(pickle.POP_MARK) + + code, f_globals, defaults, closure, dct, base_globals = self.extract_func_data(func) + + save(_fill_function) # skeleton function updater + write(pickle.MARK) # beginning of tuple that _fill_function expects + + # create a skeleton function object and memoize it + save(_make_skel_func) + save((code, len(closure), base_globals)) + write(pickle.REDUCE) + self.memoize(func) + + # save the rest of the func data needed by _fill_function + save(f_globals) + save(defaults) + save(closure) + save(dct) + write(pickle.TUPLE) + write(pickle.REDUCE) # applies _fill_function on the tuple + + @staticmethod + def extract_code_globals(co): + """ + Find all globals names read or written to by codeblock co + """ + code = co.co_code + names = co.co_names + out_names = set() + + n = len(code) + i = 0 + extended_arg = 0 + while i < n: + op = code[i] + + i = i+1 + if op >= HAVE_ARGUMENT: + oparg = ord(code[i]) + ord(code[i+1])*256 + extended_arg + extended_arg = 0 + i = i+2 + if op == EXTENDED_ARG: + extended_arg = oparg*65536L + if op in GLOBAL_OPS: + out_names.add(names[oparg]) + #print 'extracted', out_names, ' from ', names + return out_names + + def extract_func_data(self, func): + """ + Turn the function into a tuple of data necessary to recreate it: + code, globals, defaults, closure, dict + """ + code = func.func_code + + # extract all global ref's + func_global_refs = CloudPickler.extract_code_globals(code) + if code.co_consts: # see if nested function have any global refs + for const in code.co_consts: + if type(const) is types.CodeType and const.co_names: + func_global_refs = func_global_refs.union( CloudPickler.extract_code_globals(const)) + # process all variables referenced by global environment + f_globals = {} + for var in func_global_refs: + #Some names, such as class functions are not global - we don't need them + if func.func_globals.has_key(var): + f_globals[var] = func.func_globals[var] + + # defaults requires no processing + defaults = func.func_defaults + + def get_contents(cell): + try: + return cell.cell_contents + except ValueError, e: #cell is empty error on not yet assigned + raise pickle.PicklingError('Function to be pickled has free variables that are referenced before assignment in enclosing scope') + + + # process closure + if func.func_closure: + closure = map(get_contents, func.func_closure) + else: + closure = [] + + # save the dict + dct = func.func_dict + + if printSerialization: + outvars = ['code: ' + str(code) ] + outvars.append('globals: ' + str(f_globals)) + outvars.append('defaults: ' + str(defaults)) + outvars.append('closure: ' + str(closure)) + print 'function ', func, 'is extracted to: ', ', '.join(outvars) + + base_globals = self.globals_ref.get(id(func.func_globals), {}) + self.globals_ref[id(func.func_globals)] = base_globals + + return (code, f_globals, defaults, closure, dct, base_globals) + + def save_global(self, obj, name=None, pack=struct.pack): + write = self.write + memo = self.memo + + if name is None: + name = obj.__name__ + + modname = getattr(obj, "__module__", None) + if modname is None: + modname = pickle.whichmodule(obj, name) + + try: + __import__(modname) + themodule = sys.modules[modname] + except (ImportError, KeyError, AttributeError): #should never occur + raise pickle.PicklingError( + "Can't pickle %r: Module %s cannot be found" % + (obj, modname)) + + if modname == '__main__': + themodule = None + + if themodule: + self.modules.add(themodule) + + sendRef = True + typ = type(obj) + #print 'saving', obj, typ + try: + try: #Deal with case when getattribute fails with exceptions + klass = getattr(themodule, name) + except (AttributeError): + if modname == '__builtin__': #new.* are misrepeported + modname = 'new' + __import__(modname) + themodule = sys.modules[modname] + try: + klass = getattr(themodule, name) + except AttributeError, a: + #print themodule, name, obj, type(obj) + raise pickle.PicklingError("Can't pickle builtin %s" % obj) + else: + raise + + except (ImportError, KeyError, AttributeError): + if typ == types.TypeType or typ == types.ClassType: + sendRef = False + else: #we can't deal with this + raise + else: + if klass is not obj and (typ == types.TypeType or typ == types.ClassType): + sendRef = False + if not sendRef: + #note: Third party types might crash this - add better checks! + d = dict(obj.__dict__) #copy dict proxy to a dict + if not isinstance(d.get('__dict__', None), property): # don't extract dict that are properties + d.pop('__dict__',None) + d.pop('__weakref__',None) + + # hack as __new__ is stored differently in the __dict__ + new_override = d.get('__new__', None) + if new_override: + d['__new__'] = obj.__new__ + + self.save_reduce(type(obj),(obj.__name__,obj.__bases__, + d),obj=obj) + #print 'internal reduce dask %s %s' % (obj, d) + return + + if self.proto >= 2: + code = _extension_registry.get((modname, name)) + if code: + assert code > 0 + if code <= 0xff: + write(pickle.EXT1 + chr(code)) + elif code <= 0xffff: + write("%c%c%c" % (pickle.EXT2, code&0xff, code>>8)) + else: + write(pickle.EXT4 + pack("<i", code)) + return + + write(pickle.GLOBAL + modname + '\n' + name + '\n') + self.memoize(obj) + dispatch[types.ClassType] = save_global + dispatch[types.BuiltinFunctionType] = save_global + dispatch[types.TypeType] = save_global + + def save_instancemethod(self, obj): + #Memoization rarely is ever useful due to python bounding + self.save_reduce(types.MethodType, (obj.im_func, obj.im_self,obj.im_class), obj=obj) + dispatch[types.MethodType] = save_instancemethod + + def save_inst_logic(self, obj): + """Inner logic to save instance. Based off pickle.save_inst + Supports __transient__""" + cls = obj.__class__ + + memo = self.memo + write = self.write + save = self.save + + if hasattr(obj, '__getinitargs__'): + args = obj.__getinitargs__() + len(args) # XXX Assert it's a sequence + pickle._keep_alive(args, memo) + else: + args = () + + write(pickle.MARK) + + if self.bin: + save(cls) + for arg in args: + save(arg) + write(pickle.OBJ) + else: + for arg in args: + save(arg) + write(pickle.INST + cls.__module__ + '\n' + cls.__name__ + '\n') + + self.memoize(obj) + + try: + getstate = obj.__getstate__ + except AttributeError: + stuff = obj.__dict__ + #remove items if transient + if hasattr(obj, '__transient__'): + transient = obj.__transient__ + stuff = stuff.copy() + for k in list(stuff.keys()): + if k in transient: + del stuff[k] + else: + stuff = getstate() + pickle._keep_alive(stuff, memo) + save(stuff) + write(pickle.BUILD) + + + def save_inst(self, obj): + # Hack to detect PIL Image instances without importing Imaging + # PIL can be loaded with multiple names, so we don't check sys.modules for it + if hasattr(obj,'im') and hasattr(obj,'palette') and 'Image' in obj.__module__: + self.save_image(obj) + else: + self.save_inst_logic(obj) + dispatch[types.InstanceType] = save_inst + + def save_property(self, obj): + # properties not correctly saved in python + self.save_reduce(property, (obj.fget, obj.fset, obj.fdel, obj.__doc__), obj=obj) + dispatch[property] = save_property + + def save_itemgetter(self, obj): + """itemgetter serializer (needed for namedtuple support) + a bit of a pain as we need to read ctypes internals""" + class ItemGetterType(ctypes.Structure): + _fields_ = PyObject_HEAD + [ + ('nitems', ctypes.c_size_t), + ('item', ctypes.py_object) + ] + + + itemgetter_obj = ctypes.cast(ctypes.c_void_p(id(obj)), ctypes.POINTER(ItemGetterType)).contents + return self.save_reduce(operator.itemgetter, (itemgetter_obj.item,)) + + if PyObject_HEAD: + dispatch[operator.itemgetter] = save_itemgetter + + + + def save_reduce(self, func, args, state=None, + listitems=None, dictitems=None, obj=None): + """Modified to support __transient__ on new objects + Change only affects protocol level 2 (which is always used by PiCloud""" + # Assert that args is a tuple or None + if not isinstance(args, types.TupleType): + raise pickle.PicklingError("args from reduce() should be a tuple") + + # Assert that func is callable + if not hasattr(func, '__call__'): + raise pickle.PicklingError("func from reduce should be callable") + + save = self.save + write = self.write + + # Protocol 2 special case: if func's name is __newobj__, use NEWOBJ + if self.proto >= 2 and getattr(func, "__name__", "") == "__newobj__": + #Added fix to allow transient + cls = args[0] + if not hasattr(cls, "__new__"): + raise pickle.PicklingError( + "args[0] from __newobj__ args has no __new__") + if obj is not None and cls is not obj.__class__: + raise pickle.PicklingError( + "args[0] from __newobj__ args has the wrong class") + args = args[1:] + save(cls) + + #Don't pickle transient entries + if hasattr(obj, '__transient__'): + transient = obj.__transient__ + state = state.copy() + + for k in list(state.keys()): + if k in transient: + del state[k] + + save(args) + write(pickle.NEWOBJ) + else: + save(func) + save(args) + write(pickle.REDUCE) + + if obj is not None: + self.memoize(obj) + + # More new special cases (that work with older protocols as + # well): when __reduce__ returns a tuple with 4 or 5 items, + # the 4th and 5th item should be iterators that provide list + # items and dict items (as (key, value) tuples), or None. + + if listitems is not None: + self._batch_appends(listitems) + + if dictitems is not None: + self._batch_setitems(dictitems) + + if state is not None: + #print 'obj %s has state %s' % (obj, state) + save(state) + write(pickle.BUILD) + + + def save_xrange(self, obj): + """Save an xrange object in python 2.5 + Python 2.6 supports this natively + """ + range_params = xrange_params(obj) + self.save_reduce(_build_xrange,range_params) + + #python2.6+ supports xrange pickling. some py2.5 extensions might as well. We just test it + try: + xrange(0).__reduce__() + except TypeError: #can't pickle -- use PiCloud pickler + dispatch[xrange] = save_xrange + + def save_partial(self, obj): + """Partial objects do not serialize correctly in python2.x -- this fixes the bugs""" + self.save_reduce(_genpartial, (obj.func, obj.args, obj.keywords)) + + if sys.version_info < (2,7): #2.7 supports partial pickling + dispatch[partial] = save_partial + + + def save_file(self, obj): + """Save a file""" + import StringIO as pystringIO #we can't use cStringIO as it lacks the name attribute + from ..transport.adapter import SerializingAdapter + + if not hasattr(obj, 'name') or not hasattr(obj, 'mode'): + raise pickle.PicklingError("Cannot pickle files that do not map to an actual file") + if obj.name == '<stdout>': + return self.save_reduce(getattr, (sys,'stdout'), obj=obj) + if obj.name == '<stderr>': + return self.save_reduce(getattr, (sys,'stderr'), obj=obj) + if obj.name == '<stdin>': + raise pickle.PicklingError("Cannot pickle standard input") + if hasattr(obj, 'isatty') and obj.isatty(): + raise pickle.PicklingError("Cannot pickle files that map to tty objects") + if 'r' not in obj.mode: + raise pickle.PicklingError("Cannot pickle files that are not opened for reading") + name = obj.name + try: + fsize = os.stat(name).st_size + except OSError: + raise pickle.PicklingError("Cannot pickle file %s as it cannot be stat" % name) + + if obj.closed: + #create an empty closed string io + retval = pystringIO.StringIO("") + retval.close() + elif not fsize: #empty file + retval = pystringIO.StringIO("") + try: + tmpfile = file(name) + tst = tmpfile.read(1) + except IOError: + raise pickle.PicklingError("Cannot pickle file %s as it cannot be read" % name) + tmpfile.close() + if tst != '': + raise pickle.PicklingError("Cannot pickle file %s as it does not appear to map to a physical, real file" % name) + elif fsize > SerializingAdapter.max_transmit_data: + raise pickle.PicklingError("Cannot pickle file %s as it exceeds cloudconf.py's max_transmit_data of %d" % + (name,SerializingAdapter.max_transmit_data)) + else: + try: + tmpfile = file(name) + contents = tmpfile.read(SerializingAdapter.max_transmit_data) + tmpfile.close() + except IOError: + raise pickle.PicklingError("Cannot pickle file %s as it cannot be read" % name) + retval = pystringIO.StringIO(contents) + curloc = obj.tell() + retval.seek(curloc) + + retval.name = name + self.save(retval) #save stringIO + self.memoize(obj) + + dispatch[file] = save_file + """Special functions for Add-on libraries""" + + def inject_numpy(self): + numpy = sys.modules.get('numpy') + if not numpy or not hasattr(numpy, 'ufunc'): + return + self.dispatch[numpy.ufunc] = self.__class__.save_ufunc + + numpy_tst_mods = ['numpy', 'scipy.special'] + def save_ufunc(self, obj): + """Hack function for saving numpy ufunc objects""" + name = obj.__name__ + for tst_mod_name in self.numpy_tst_mods: + tst_mod = sys.modules.get(tst_mod_name, None) + if tst_mod: + if name in tst_mod.__dict__: + self.save_reduce(_getobject, (tst_mod_name, name)) + return + raise pickle.PicklingError('cannot save %s. Cannot resolve what module it is defined in' % str(obj)) + + def inject_timeseries(self): + """Handle bugs with pickling scikits timeseries""" + tseries = sys.modules.get('scikits.timeseries.tseries') + if not tseries or not hasattr(tseries, 'Timeseries'): + return + self.dispatch[tseries.Timeseries] = self.__class__.save_timeseries + + def save_timeseries(self, obj): + import scikits.timeseries.tseries as ts + + func, reduce_args, state = obj.__reduce__() + if func != ts._tsreconstruct: + raise pickle.PicklingError('timeseries using unexpected reconstruction function %s' % str(func)) + state = (1, + obj.shape, + obj.dtype, + obj.flags.fnc, + obj._data.tostring(), + ts.getmaskarray(obj).tostring(), + obj._fill_value, + obj._dates.shape, + obj._dates.__array__().tostring(), + obj._dates.dtype, #added -- preserve type + obj.freq, + obj._optinfo, + ) + return self.save_reduce(_genTimeSeries, (reduce_args, state)) + + def inject_email(self): + """Block email LazyImporters from being saved""" + email = sys.modules.get('email') + if not email: + return + self.dispatch[email.LazyImporter] = self.__class__.save_unsupported + + def inject_addons(self): + """Plug in system. Register additional pickling functions if modules already loaded""" + self.inject_numpy() + self.inject_timeseries() + self.inject_email() + + """Python Imaging Library""" + def save_image(self, obj): + if not obj.im and obj.fp and 'r' in obj.fp.mode and obj.fp.name \ + and not obj.fp.closed and (not hasattr(obj, 'isatty') or not obj.isatty()): + #if image not loaded yet -- lazy load + self.save_reduce(_lazyloadImage,(obj.fp,), obj=obj) + else: + #image is loaded - just transmit it over + self.save_reduce(_generateImage, (obj.size, obj.mode, obj.tostring()), obj=obj) + + """ + def memoize(self, obj): + pickle.Pickler.memoize(self, obj) + if printMemoization: + print 'memoizing ' + str(obj) + """ + + + +# Shorthands for legacy support + +def dump(obj, file, protocol=2): + CloudPickler(file, protocol).dump(obj) + +def dumps(obj, protocol=2): + file = StringIO() + + cp = CloudPickler(file,protocol) + cp.dump(obj) + + #print 'cloud dumped', str(obj), str(cp.modules) + + return file.getvalue() + + +#hack for __import__ not working as desired +def subimport(name): + __import__(name) + return sys.modules[name] + +#hack to load django settings: +def django_settings_load(name): + modified_env = False + + if 'DJANGO_SETTINGS_MODULE' not in os.environ: + os.environ['DJANGO_SETTINGS_MODULE'] = name # must set name first due to circular deps + modified_env = True + try: + module = subimport(name) + except Exception, i: + print >> sys.stderr, 'Cloud not import django settings %s:' % (name) + print_exec(sys.stderr) + if modified_env: + del os.environ['DJANGO_SETTINGS_MODULE'] + else: + #add project directory to sys,path: + if hasattr(module,'__file__'): + dirname = os.path.split(module.__file__)[0] + '/' + sys.path.append(dirname) + +# restores function attributes +def _restore_attr(obj, attr): + for key, val in attr.items(): + setattr(obj, key, val) + return obj + +def _get_module_builtins(): + return pickle.__builtins__ + +def print_exec(stream): + ei = sys.exc_info() + traceback.print_exception(ei[0], ei[1], ei[2], None, stream) + +def _modules_to_main(modList): + """Force every module in modList to be placed into main""" + if not modList: + return + + main = sys.modules['__main__'] + for modname in modList: + if type(modname) is str: + try: + mod = __import__(modname) + except Exception, i: #catch all... + sys.stderr.write('warning: could not import %s\n. Your function may unexpectedly error due to this import failing; \ +A version mismatch is likely. Specific error was:\n' % modname) + print_exec(sys.stderr) + else: + setattr(main,mod.__name__, mod) + else: + #REVERSE COMPATIBILITY FOR CLOUD CLIENT 1.5 (WITH EPD) + #In old version actual module was sent + setattr(main,modname.__name__, modname) + +#object generators: +def _build_xrange(start, step, len): + """Built xrange explicitly""" + return xrange(start, start + step*len, step) + +def _genpartial(func, args, kwds): + if not args: + args = () + if not kwds: + kwds = {} + return partial(func, *args, **kwds) + + +def _fill_function(func, globals, defaults, closure, dict): + """ Fills in the rest of function data into the skeleton function object + that were created via _make_skel_func(). + """ + func.func_globals.update(globals) + func.func_defaults = defaults + func.func_dict = dict + + if len(closure) != len(func.func_closure): + raise pickle.UnpicklingError("closure lengths don't match up") + for i in range(len(closure)): + _change_cell_value(func.func_closure[i], closure[i]) + + return func + +def _make_skel_func(code, num_closures, base_globals = None): + """ Creates a skeleton function object that contains just the provided + code and the correct number of cells in func_closure. All other + func attributes (e.g. func_globals) are empty. + """ + #build closure (cells): + if not ctypes: + raise Exception('ctypes failed to import; cannot build function') + + cellnew = ctypes.pythonapi.PyCell_New + cellnew.restype = ctypes.py_object + cellnew.argtypes = (ctypes.py_object,) + dummy_closure = tuple(map(lambda i: cellnew(None), range(num_closures))) + + if base_globals is None: + base_globals = {} + base_globals['__builtins__'] = __builtins__ + + return types.FunctionType(code, base_globals, + None, None, dummy_closure) + +# this piece of opaque code is needed below to modify 'cell' contents +cell_changer_code = new.code( + 1, 1, 2, 0, + ''.join([ + chr(dis.opmap['LOAD_FAST']), '\x00\x00', + chr(dis.opmap['DUP_TOP']), + chr(dis.opmap['STORE_DEREF']), '\x00\x00', + chr(dis.opmap['RETURN_VALUE']) + ]), + (), (), ('newval',), '<nowhere>', 'cell_changer', 1, '', ('c',), () +) + +def _change_cell_value(cell, newval): + """ Changes the contents of 'cell' object to newval """ + return new.function(cell_changer_code, {}, None, (), (cell,))(newval) + +"""Constructors for 3rd party libraries +Note: These can never be renamed due to client compatibility issues""" + +def _getobject(modname, attribute): + mod = __import__(modname) + return mod.__dict__[attribute] + +def _generateImage(size, mode, str_rep): + """Generate image from string representation""" + import Image + i = Image.new(mode, size) + i.fromstring(str_rep) + return i + +def _lazyloadImage(fp): + import Image + fp.seek(0) #works in almost any case + return Image.open(fp) + +"""Timeseries""" +def _genTimeSeries(reduce_args, state): + import scikits.timeseries.tseries as ts + from numpy import ndarray + from numpy.ma import MaskedArray + + + time_series = ts._tsreconstruct(*reduce_args) + + #from setstate modified + (ver, shp, typ, isf, raw, msk, flv, dsh, dtm, dtyp, frq, infodict) = state + #print 'regenerating %s' % dtyp + + MaskedArray.__setstate__(time_series, (ver, shp, typ, isf, raw, msk, flv)) + _dates = time_series._dates + #_dates.__setstate__((ver, dsh, typ, isf, dtm, frq)) #use remote typ + ndarray.__setstate__(_dates,(dsh,dtyp, isf, dtm)) + _dates.freq = frq + _dates._cachedinfo.update(dict(full=None, hasdups=None, steps=None, + toobj=None, toord=None, tostr=None)) + # Update the _optinfo dictionary + time_series._optinfo.update(infodict) + return time_series + |