aboutsummaryrefslogtreecommitdiff
path: root/python/pyspark/mllib/tree.py
blob: ef0d556fac7bca78168da1eb818a8c96f5af6243 (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements.  See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License.  You may obtain a copy of the License at
#
#    http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#

from pyspark import SparkContext, RDD
from pyspark.mllib.common import callMLlibFunc, JavaModelWrapper
from pyspark.mllib.linalg import _convert_to_vector
from pyspark.mllib.regression import LabeledPoint

__all__ = ['DecisionTreeModel', 'DecisionTree']


class DecisionTreeModel(JavaModelWrapper):

    """
    A decision tree model for classification or regression.

    EXPERIMENTAL: This is an experimental API.
                  It will probably be modified in future.
    """
    def predict(self, x):
        """
        Predict the label of one or more examples.

        :param x:  Data point (feature vector),
                   or an RDD of data points (feature vectors).
        """
        if isinstance(x, RDD):
            return self.call("predict", x.map(_convert_to_vector))

        else:
            return self.call("predict", _convert_to_vector(x))

    def numNodes(self):
        return self._java_model.numNodes()

    def depth(self):
        return self._java_model.depth()

    def __repr__(self):
        """ Print summary of model. """
        return self._java_model.toString()

    def toDebugString(self):
        """ Print full model. """
        return self._java_model.toDebugString()


class DecisionTree(object):

    """
    Learning algorithm for a decision tree model
    for classification or regression.

    EXPERIMENTAL: This is an experimental API.
                  It will probably be modified for Spark v1.2.

    """

    @staticmethod
    def _train(data, type, numClasses, features, impurity="gini", maxDepth=5, maxBins=32,
               minInstancesPerNode=1, minInfoGain=0.0):
        first = data.first()
        assert isinstance(first, LabeledPoint), "the data should be RDD of LabeledPoint"
        model = callMLlibFunc("trainDecisionTreeModel", data, type, numClasses, features,
                              impurity, maxDepth, maxBins, minInstancesPerNode, minInfoGain)
        return DecisionTreeModel(model)

    @staticmethod
    def trainClassifier(data, numClasses, categoricalFeaturesInfo,
                        impurity="gini", maxDepth=5, maxBins=32, minInstancesPerNode=1,
                        minInfoGain=0.0):
        """
        Train a DecisionTreeModel for classification.

        :param data: Training data: RDD of LabeledPoint.
                     Labels are integers {0,1,...,numClasses}.
        :param numClasses: Number of classes for classification.
        :param categoricalFeaturesInfo: Map from categorical feature index
                                        to number of categories.
                                        Any feature not in this map
                                        is treated as continuous.
        :param impurity: Supported values: "entropy" or "gini"
        :param maxDepth: Max depth of tree.
                         E.g., depth 0 means 1 leaf node.
                         Depth 1 means 1 internal node + 2 leaf nodes.
        :param maxBins: Number of bins used for finding splits at each node.
        :param minInstancesPerNode: Min number of instances required at child nodes to create
                                    the parent split
        :param minInfoGain: Min info gain required to create a split
        :return: DecisionTreeModel

        Example usage:

        >>> from numpy import array
        >>> from pyspark.mllib.regression import LabeledPoint
        >>> from pyspark.mllib.tree import DecisionTree
        >>>
        >>> data = [
        ...     LabeledPoint(0.0, [0.0]),
        ...     LabeledPoint(1.0, [1.0]),
        ...     LabeledPoint(1.0, [2.0]),
        ...     LabeledPoint(1.0, [3.0])
        ... ]
        >>> model = DecisionTree.trainClassifier(sc.parallelize(data), 2, {})
        >>> print model,  # it already has newline
        DecisionTreeModel classifier of depth 1 with 3 nodes
        >>> print model.toDebugString(),  # it already has newline
        DecisionTreeModel classifier of depth 1 with 3 nodes
          If (feature 0 <= 0.0)
           Predict: 0.0
          Else (feature 0 > 0.0)
           Predict: 1.0
        >>> model.predict(array([1.0]))
        1.0
        >>> model.predict(array([0.0]))
        0.0
        >>> rdd = sc.parallelize([[1.0], [0.0]])
        >>> model.predict(rdd).collect()
        [1.0, 0.0]
        """
        return DecisionTree._train(data, "classification", numClasses, categoricalFeaturesInfo,
                                   impurity, maxDepth, maxBins, minInstancesPerNode, minInfoGain)

    @staticmethod
    def trainRegressor(data, categoricalFeaturesInfo,
                       impurity="variance", maxDepth=5, maxBins=32, minInstancesPerNode=1,
                       minInfoGain=0.0):
        """
        Train a DecisionTreeModel for regression.

        :param data: Training data: RDD of LabeledPoint.
                     Labels are real numbers.
        :param categoricalFeaturesInfo: Map from categorical feature index
                                        to number of categories.
                                        Any feature not in this map
                                        is treated as continuous.
        :param impurity: Supported values: "variance"
        :param maxDepth: Max depth of tree.
                         E.g., depth 0 means 1 leaf node.
                         Depth 1 means 1 internal node + 2 leaf nodes.
        :param maxBins: Number of bins used for finding splits at each node.
        :param minInstancesPerNode: Min number of instances required at child nodes to create
                                    the parent split
        :param minInfoGain: Min info gain required to create a split
        :return: DecisionTreeModel

        Example usage:

        >>> from numpy import array
        >>> from pyspark.mllib.regression import LabeledPoint
        >>> from pyspark.mllib.tree import DecisionTree
        >>> from pyspark.mllib.linalg import SparseVector
        >>>
        >>> sparse_data = [
        ...     LabeledPoint(0.0, SparseVector(2, {0: 0.0})),
        ...     LabeledPoint(1.0, SparseVector(2, {1: 1.0})),
        ...     LabeledPoint(0.0, SparseVector(2, {0: 0.0})),
        ...     LabeledPoint(1.0, SparseVector(2, {1: 2.0}))
        ... ]
        >>>
        >>> model = DecisionTree.trainRegressor(sc.parallelize(sparse_data), {})
        >>> model.predict(SparseVector(2, {1: 1.0}))
        1.0
        >>> model.predict(SparseVector(2, {1: 0.0}))
        0.0
        >>> rdd = sc.parallelize([[0.0, 1.0], [0.0, 0.0]])
        >>> model.predict(rdd).collect()
        [1.0, 0.0]
        """
        return DecisionTree._train(data, "regression", 0, categoricalFeaturesInfo,
                                   impurity, maxDepth, maxBins, minInstancesPerNode, minInfoGain)


def _test():
    import doctest
    globs = globals().copy()
    globs['sc'] = SparkContext('local[4]', 'PythonTest', batchSize=2)
    (failure_count, test_count) = doctest.testmod(globs=globs, optionflags=doctest.ELLIPSIS)
    globs['sc'].stop()
    if failure_count:
        exit(-1)

if __name__ == "__main__":
    _test()