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Diffstat (limited to 'src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala')
-rw-r--r--src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala36
1 files changed, 3 insertions, 33 deletions
diff --git a/src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala b/src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala
index cf55694..3a9434b 100644
--- a/src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala
+++ b/src/main/scala/xyz/driver/pdsuidomain/entities/export/trial/ExportTrialWithLabels.scala
@@ -4,13 +4,11 @@ import java.time.LocalDateTime
import xyz.driver.pdsuicommon.domain._
import xyz.driver.pdsuicommon.logging._
-import xyz.driver.pdsuidomain.entities.{RawTrialLabel, Trial}
-
-import scala.collection.breakOut
+import xyz.driver.pdsuidomain.entities.Trial
final case class ExportTrialWithLabels(nctId: StringId[Trial],
trialId: UuidId[Trial],
- condition: String,
+ disease: String,
lastReviewed: LocalDateTime,
labelVersion: Long,
arms: List[ExportTrialArm],
@@ -20,35 +18,7 @@ object ExportTrialWithLabels {
implicit def toPhiString(x: ExportTrialWithLabels): PhiString = {
import x._
- phi"TrialWithLabels(nctId=$nctId, trialId=$trialId, condition=${Unsafe(condition)}, " +
+ phi"TrialWithLabels(nctId=$nctId, trialId=$trialId, disease=${Unsafe(disease)}, " +
phi"lastReviewed=$lastReviewed, labelVersion=${Unsafe(labelVersion)}, arms=$arms, criteria=$criteria)"
}
-
- def fromRaw(rawData: List[RawTrialLabel]): ExportTrialWithLabels = {
- val trials: Set[StringId[Trial]] = rawData.map(_.nctId)(breakOut)
-
- assert(trials.size == 1, "There are more than one trial in the rawData")
- val trial = rawData.head
-
- ExportTrialWithLabels(
- nctId = trial.nctId,
- trialId = trial.trialId,
- condition = trial.condition,
- lastReviewed = trial.lastReviewed,
- labelVersion = 1, // TODO It is needed to replace this mock label version.
- arms = rawData
- .groupBy(_.armId)
- .map {
- case (armId, rawTrials) =>
- ExportTrialArm(armId, rawTrials.head.armName)
- }(breakOut),
- criteria = rawData
- .groupBy(x => (x.criterionId, x.labelId))
- .map {
- case (_, rawTrialLabels) =>
- val armIds = rawTrialLabels.map(_.criterionArmId).toSet
- ExportTrialLabelCriterion.fromRaw(rawTrialLabels.head, armIds)
- }(breakOut)
- )
- }
}