path: root/R/check-cran.sh

#!/bin/bash

#
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements.  See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License.  You may obtain a copy of the License at
#
#    http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#

set -o pipefail
set -e

FWDIR="$(cd `dirname $0`; pwd)"
pushd $FWDIR > /dev/null

if [ ! -z "$R_HOME" ]
  then
    R_SCRIPT_PATH="$R_HOME/bin"
  else
    # if system wide R_HOME is not found, then exit
    if [ ! `command -v R` ]; then
      echo "Cannot find 'R_HOME'. Please specify 'R_HOME' or make sure R is properly installed."
      exit 1
    fi
    R_SCRIPT_PATH="$(dirname $(which R))"
fi
echo "Using R_SCRIPT_PATH = ${R_SCRIPT_PATH}"

# Install the package (this is required for code in vignettes to run when building it later)
# Build the latest docs, but not vignettes, which is built with the package next
$FWDIR/create-docs.sh

# Build source package with vignettes
SPARK_HOME="$(cd "${FWDIR}"/..; pwd)"
. "${SPARK_HOME}"/bin/load-spark-env.sh
if [ -f "${SPARK_HOME}/RELEASE" ]; then
  SPARK_JARS_DIR="${SPARK_HOME}/jars"
else
  SPARK_JARS_DIR="${SPARK_HOME}/assembly/target/scala-$SPARK_SCALA_VERSION/jars"
fi

if [ -d "$SPARK_JARS_DIR" ]; then
  # Build a zip file containing the source package with vignettes
  SPARK_HOME="${SPARK_HOME}" "$R_SCRIPT_PATH/"R CMD build $FWDIR/pkg

  find pkg/vignettes/. -not -name '.' -not -name '*.Rmd' -not -name '*.md' -not -name '*.pdf' -not -name '*.html' -delete
else
  echo "Error Spark JARs not found in $SPARK_HOME"
  exit 1
fi

# Run check as-cran.
VERSION=`grep Version $FWDIR/pkg/DESCRIPTION | awk '{print $NF}'`

CRAN_CHECK_OPTIONS="--as-cran"

if [ -n "$NO_TESTS" ]
then
  CRAN_CHECK_OPTIONS=$CRAN_CHECK_OPTIONS" --no-tests"
fi

if [ -n "$NO_MANUAL" ]
then
  CRAN_CHECK_OPTIONS=$CRAN_CHECK_OPTIONS" --no-manual --no-vignettes"
fi

echo "Running CRAN check with $CRAN_CHECK_OPTIONS options"

if [ -n "$NO_TESTS" ] && [ -n "$NO_MANUAL" ]
then
  "$R_SCRIPT_PATH/"R CMD check $CRAN_CHECK_OPTIONS SparkR_"$VERSION".tar.gz
else
  # This will run tests and/or build vignettes, and require SPARK_HOME
  SPARK_HOME="${SPARK_HOME}" "$R_SCRIPT_PATH/"R CMD check $CRAN_CHECK_OPTIONS SparkR_"$VERSION".tar.gz
fi

# Install source package to get it to generate vignettes rds files, etc.
if [ -n "$CLEAN_INSTALL" ]
then
  echo "Removing lib path and installing from source package"
  LIB_DIR="$FWDIR/lib"
  rm -rf $LIB_DIR
  mkdir -p $LIB_DIR
  "$R_SCRIPT_PATH/"R CMD INSTALL SparkR_"$VERSION".tar.gz --library=$LIB_DIR

  # Zip the SparkR package so that it can be distributed to worker nodes on YARN
  pushd $LIB_DIR > /dev/null
  jar cfM "$LIB_DIR/sparkr.zip" SparkR
  popd > /dev/null
fi

popd > /dev/null