[SPARK-2850] [SPARK-2626] [mllib] MLlib stats examples + small fixes

Added examples for statistical summarization:
* Scala: StatisticalSummary.scala
** Tests: correlation, MultivariateOnlineSummarizer
* python: statistical_summary.py
** Tests: correlation (since MultivariateOnlineSummarizer has no Python API)

Added examples for random and sampled RDDs:
* Scala: RandomAndSampledRDDs.scala
* python: random_and_sampled_rdds.py
* Both test:
** RandomRDDGenerators.normalRDD, normalVectorRDD
** RDD.sample, takeSample, sampleByKey

Added sc.stop() to all examples.

CorrelationSuite.scala
* Added 1 test for RDDs with only 1 value

RowMatrix.scala
* numCols(): Added check for numRows = 0, with error message.
* computeCovariance(): Added check for numRows <= 1, with error message.

Python SparseVector (pyspark/mllib/linalg.py)
* Added toDense() function

python/run-tests script
* Added stat.py (doc test)

CC: mengxr dorx  Main changes were examples to show usage across APIs.

Author: Joseph K. Bradley <joseph.kurata.bradley@gmail.com>

Closes #1878 from jkbradley/mllib-stats-api-check and squashes the following commits:

ea5c047 [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into mllib-stats-api-check
dafebe2 [Joseph K. Bradley] Bug fixes for examples SampledRDDs.scala and sampled_rdds.py: Check for division by 0 and for missing key in maps.
8d1e555 [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into mllib-stats-api-check
60c72d9 [Joseph K. Bradley] Fixed stat.py doc test to work for Python versions printing nan or NaN.
b20d90a [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into mllib-stats-api-check
4e5d15e [Joseph K. Bradley] Changed pyspark/mllib/stat.py doc tests to use NaN instead of nan.
32173b7 [Joseph K. Bradley] Stats examples update.
c8c20dc [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into mllib-stats-api-check
cf70b07 [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into mllib-stats-api-check
0b7cec3 [Joseph K. Bradley] Small updates based on code review.  Renamed statistical_summary.py to correlations.py
ab48f6e [Joseph K. Bradley] RowMatrix.scala * numCols(): Added check for numRows = 0, with error message. * computeCovariance(): Added check for numRows <= 1, with error message.
65e4ebc [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into mllib-stats-api-check
8195c78 [Joseph K. Bradley] Added examples for random and sampled RDDs: * Scala: RandomAndSampledRDDs.scala * python: random_and_sampled_rdds.py * Both test: ** RandomRDDGenerators.normalRDD, normalVectorRDD ** RDD.sample, takeSample, sampleByKey
064985b [Joseph K. Bradley] Merge remote-tracking branch 'upstream/master' into mllib-stats-api-check
ee918e9 [Joseph K. Bradley] Added examples for statistical summarization: * Scala: StatisticalSummary.scala ** Tests: correlation, MultivariateOnlineSummarizer * python: statistical_summary.py ** Tests: correlation (since MultivariateOnlineSummarizer has no Python API)

1 files changed, 1 insertions, 0 deletions

diff --git a/python/run-tests b/python/run-tests
index a6271e0cf5..b506559a5e 100755
--- a/python/run-tests
+++ b/python/run-tests
@@ -78,6 +78,7 @@ run_test "pyspark/mllib/linalg.py"
 run_test "pyspark/mllib/random.py"
 run_test "pyspark/mllib/recommendation.py"
 run_test "pyspark/mllib/regression.py"
+run_test "pyspark/mllib/stat.py"
 run_test "pyspark/mllib/tests.py"
 run_test "pyspark/mllib/tree.py"
 run_test "pyspark/mllib/util.py"