path: root/docs/ml-guide.md

---
layout: global
title: Spark ML Programming Guide
---

Spark 1.2 introduced a new package called `spark.ml`, which aims to provide a uniform set of
high-level APIs that help users create and tune practical machine learning pipelines.

*Graduated from Alpha!*  The Pipelines API is no longer an alpha component, although many elements of it are still `Experimental` or `DeveloperApi`.

Note that we will keep supporting and adding features to `spark.mllib` along with the
development of `spark.ml`.
Users should be comfortable using `spark.mllib` features and expect more features coming.
Developers should contribute new algorithms to `spark.mllib` and can optionally contribute
to `spark.ml`.

Guides for sub-packages of `spark.ml` include:

* [Feature Extraction, Transformation, and Selection](ml-features.html): Details on transformers supported in the Pipelines API, including a few not in the lower-level `spark.mllib` API
* [Ensembles](ml-ensembles.html): Details on ensemble learning methods in the Pipelines API


**Table of Contents**

* This will become a table of contents (this text will be scraped).
{:toc}

# Main Concepts

Spark ML standardizes APIs for machine learning algorithms to make it easier to combine multiple algorithms into a single pipeline, or workflow.  This section covers the key concepts introduced by the Spark ML API.

* **[ML Dataset](ml-guide.html#ml-dataset)**: Spark ML uses the [`DataFrame`](api/scala/index.html#org.apache.spark.sql.DataFrame) from Spark SQL as a dataset which can hold a variety of data types.
E.g., a dataset could have different columns storing text, feature vectors, true labels, and predictions.

* **[`Transformer`](ml-guide.html#transformers)**: A `Transformer` is an algorithm which can transform one `DataFrame` into another `DataFrame`.
E.g., an ML model is a `Transformer` which transforms an RDD with features into an RDD with predictions.

* **[`Estimator`](ml-guide.html#estimators)**: An `Estimator` is an algorithm which can be fit on a `DataFrame` to produce a `Transformer`.
E.g., a learning algorithm is an `Estimator` which trains on a dataset and produces a model.

* **[`Pipeline`](ml-guide.html#pipeline)**: A `Pipeline` chains multiple `Transformer`s and `Estimator`s together to specify an ML workflow.

* **[`Param`](ml-guide.html#parameters)**: All `Transformer`s and `Estimator`s now share a common API for specifying parameters.

## ML Dataset

Machine learning can be applied to a wide variety of data types, such as vectors, text, images, and structured data.
Spark ML adopts the [`DataFrame`](api/scala/index.html#org.apache.spark.sql.DataFrame) from Spark SQL in order to support a variety of data types under a unified Dataset concept.

`DataFrame` supports many basic and structured types; see the [Spark SQL datatype reference](sql-programming-guide.html#spark-sql-datatype-reference) for a list of supported types.
In addition to the types listed in the Spark SQL guide, `DataFrame` can use ML [`Vector`](api/scala/index.html#org.apache.spark.mllib.linalg.Vector) types.

A `DataFrame` can be created either implicitly or explicitly from a regular `RDD`.  See the code examples below and the [Spark SQL programming guide](sql-programming-guide.html) for examples.

Columns in a `DataFrame` are named.  The code examples below use names such as "text," "features," and "label."

## ML Algorithms

### Transformers

A [`Transformer`](api/scala/index.html#org.apache.spark.ml.Transformer) is an abstraction which includes feature transformers and learned models.  Technically, a `Transformer` implements a method `transform()` which converts one `DataFrame` into another, generally by appending one or more columns.
For example:

* A feature transformer might take a dataset, read a column (e.g., text), convert it into a new column (e.g., feature vectors), append the new column to the dataset, and output the updated dataset.
* A learning model might take a dataset, read the column containing feature vectors, predict the label for each feature vector, append the labels as a new column, and output the updated dataset.

### Estimators

An [`Estimator`](api/scala/index.html#org.apache.spark.ml.Estimator) abstracts the concept of a learning algorithm or any algorithm which fits or trains on data.  Technically, an `Estimator` implements a method `fit()` which accepts a `DataFrame` and produces a `Transformer`.
For example, a learning algorithm such as `LogisticRegression` is an `Estimator`, and calling `fit()` trains a `LogisticRegressionModel`, which is a `Transformer`.

### Properties of ML Algorithms

`Transformer`s and `Estimator`s are both stateless.  In the future, stateful algorithms may be supported via alternative concepts.

Each instance of a `Transformer` or `Estimator` has a unique ID, which is useful in specifying parameters (discussed below).

## Pipeline

In machine learning, it is common to run a sequence of algorithms to process and learn from data.
E.g., a simple text document processing workflow might include several stages:

* Split each document's text into words.
* Convert each document's words into a numerical feature vector.
* Learn a prediction model using the feature vectors and labels.

Spark ML represents such a workflow as a [`Pipeline`](api/scala/index.html#org.apache.spark.ml.Pipeline),
which consists of a sequence of [`PipelineStage`s](api/scala/index.html#org.apache.spark.ml.PipelineStage) (`Transformer`s and `Estimator`s) to be run in a specific order.  We will use this simple workflow as a running example in this section.

### How It Works

A `Pipeline` is specified as a sequence of stages, and each stage is either a `Transformer` or an `Estimator`.
These stages are run in order, and the input dataset is modified as it passes through each stage.
For `Transformer` stages, the `transform()` method is called on the dataset.
For `Estimator` stages, the `fit()` method is called to produce a `Transformer` (which becomes part of the `PipelineModel`, or fitted `Pipeline`), and that `Transformer`'s `transform()` method is called on the dataset.

We illustrate this for the simple text document workflow.  The figure below is for the *training time* usage of a `Pipeline`.

<p style="text-align: center;">
  <img
    src="img/ml-Pipeline.png"
    title="Spark ML Pipeline Example"
    alt="Spark ML Pipeline Example"
    width="80%"
  />
</p>

Above, the top row represents a `Pipeline` with three stages.
The first two (`Tokenizer` and `HashingTF`) are `Transformer`s (blue), and the third (`LogisticRegression`) is an `Estimator` (red).
The bottom row represents data flowing through the pipeline, where cylinders indicate `DataFrame`s.
The `Pipeline.fit()` method is called on the original dataset which has raw text documents and labels.
The `Tokenizer.transform()` method splits the raw text documents into words, adding a new column with words into the dataset.
The `HashingTF.transform()` method converts the words column into feature vectors, adding a new column with those vectors to the dataset.
Now, since `LogisticRegression` is an `Estimator`, the `Pipeline` first calls `LogisticRegression.fit()` to produce a `LogisticRegressionModel`.
If the `Pipeline` had more stages, it would call the `LogisticRegressionModel`'s `transform()` method on the dataset before passing the dataset to the next stage.

A `Pipeline` is an `Estimator`.
Thus, after a `Pipeline`'s `fit()` method runs, it produces a `PipelineModel` which is a `Transformer`.  This `PipelineModel` is used at *test time*; the figure below illustrates this usage.

<p style="text-align: center;">
  <img
    src="img/ml-PipelineModel.png"
    title="Spark ML PipelineModel Example"
    alt="Spark ML PipelineModel Example"
    width="80%"
  />
</p>

In the figure above, the `PipelineModel` has the same number of stages as the original `Pipeline`, but all `Estimator`s in the original `Pipeline` have become `Transformer`s.
When the `PipelineModel`'s `transform()` method is called on a test dataset, the data are passed through the `Pipeline` in order.
Each stage's `transform()` method updates the dataset and passes it to the next stage.

`Pipeline`s and `PipelineModel`s help to ensure that training and test data go through identical feature processing steps.

### Details

*DAG `Pipeline`s*: A `Pipeline`'s stages are specified as an ordered array.  The examples given here are all for linear `Pipeline`s, i.e., `Pipeline`s in which each stage uses data produced by the previous stage.  It is possible to create non-linear `Pipeline`s as long as the data flow graph forms a Directed Acyclic Graph (DAG).  This graph is currently specified implicitly based on the input and output column names of each stage (generally specified as parameters).  If the `Pipeline` forms a DAG, then the stages must be specified in topological order.

*Runtime checking*: Since `Pipeline`s can operate on datasets with varied types, they cannot use compile-time type checking.  `Pipeline`s and `PipelineModel`s instead do runtime checking before actually running the `Pipeline`.  This type checking is done using the dataset *schema*, a description of the data types of columns in the `DataFrame`.

## Parameters

Spark ML `Estimator`s and `Transformer`s use a uniform API for specifying parameters.

A [`Param`](api/scala/index.html#org.apache.spark.ml.param.Param) is a named parameter with self-contained documentation.
A [`ParamMap`](api/scala/index.html#org.apache.spark.ml.param.ParamMap) is a set of (parameter, value) pairs.

There are two main ways to pass parameters to an algorithm:

1. Set parameters for an instance.  E.g., if `lr` is an instance of `LogisticRegression`, one could call `lr.setMaxIter(10)` to make `lr.fit()` use at most 10 iterations.  This API resembles the API used in MLlib.
2. Pass a `ParamMap` to `fit()` or `transform()`.  Any parameters in the `ParamMap` will override parameters previously specified via setter methods.

Parameters belong to specific instances of `Estimator`s and `Transformer`s.
For example, if we have two `LogisticRegression` instances `lr1` and `lr2`, then we can build a `ParamMap` with both `maxIter` parameters specified: `ParamMap(lr1.maxIter -> 10, lr2.maxIter -> 20)`.
This is useful if there are two algorithms with the `maxIter` parameter in a `Pipeline`.

# Code Examples

This section gives code examples illustrating the functionality discussed above.
There is not yet documentation for specific algorithms in Spark ML.  For more info, please refer to the [API Documentation](api/scala/index.html#org.apache.spark.ml.package).  Spark ML algorithms are currently wrappers for MLlib algorithms, and the [MLlib programming guide](mllib-guide.html) has details on specific algorithms.

## Example: Estimator, Transformer, and Param

This example covers the concepts of `Estimator`, `Transformer`, and `Param`.

<div class="codetabs">

<div data-lang="scala">
{% highlight scala %}
import org.apache.spark.{SparkConf, SparkContext}
import org.apache.spark.ml.classification.LogisticRegression
import org.apache.spark.ml.param.ParamMap
import org.apache.spark.mllib.linalg.{Vector, Vectors}
import org.apache.spark.mllib.regression.LabeledPoint
import org.apache.spark.sql.{Row, SQLContext}

val conf = new SparkConf().setAppName("SimpleParamsExample")
val sc = new SparkContext(conf)
val sqlContext = new SQLContext(sc)
import sqlContext.implicits._

// Prepare training data.
// We use LabeledPoint, which is a case class.  Spark SQL can convert RDDs of case classes
// into DataFrames, where it uses the case class metadata to infer the schema.
val training = sc.parallelize(Seq(
  LabeledPoint(1.0, Vectors.dense(0.0, 1.1, 0.1)),
  LabeledPoint(0.0, Vectors.dense(2.0, 1.0, -1.0)),
  LabeledPoint(0.0, Vectors.dense(2.0, 1.3, 1.0)),
  LabeledPoint(1.0, Vectors.dense(0.0, 1.2, -0.5))))

// Create a LogisticRegression instance.  This instance is an Estimator.
val lr = new LogisticRegression()
// Print out the parameters, documentation, and any default values.
println("LogisticRegression parameters:\n" + lr.explainParams() + "\n")

// We may set parameters using setter methods.
lr.setMaxIter(10)
  .setRegParam(0.01)

// Learn a LogisticRegression model.  This uses the parameters stored in lr.
val model1 = lr.fit(training.toDF)
// Since model1 is a Model (i.e., a Transformer produced by an Estimator),
// we can view the parameters it used during fit().
// This prints the parameter (name: value) pairs, where names are unique IDs for this
// LogisticRegression instance.
println("Model 1 was fit using parameters: " + model1.parent.extractParamMap)

// We may alternatively specify parameters using a ParamMap,
// which supports several methods for specifying parameters.
val paramMap = ParamMap(lr.maxIter -> 20)
paramMap.put(lr.maxIter, 30) // Specify 1 Param.  This overwrites the original maxIter.
paramMap.put(lr.regParam -> 0.1, lr.threshold -> 0.55) // Specify multiple Params.

// One can also combine ParamMaps.
val paramMap2 = ParamMap(lr.probabilityCol -> "myProbability") // Change output column name
val paramMapCombined = paramMap ++ paramMap2

// Now learn a new model using the paramMapCombined parameters.
// paramMapCombined overrides all parameters set earlier via lr.set* methods.
val model2 = lr.fit(training.toDF, paramMapCombined)
println("Model 2 was fit using parameters: " + model2.parent.extractParamMap)

// Prepare test data.
val test = sc.parallelize(Seq(
  LabeledPoint(1.0, Vectors.dense(-1.0, 1.5, 1.3)),
  LabeledPoint(0.0, Vectors.dense(3.0, 2.0, -0.1)),
  LabeledPoint(1.0, Vectors.dense(0.0, 2.2, -1.5))))

// Make predictions on test data using the Transformer.transform() method.
// LogisticRegression.transform will only use the 'features' column.
// Note that model2.transform() outputs a 'myProbability' column instead of the usual
// 'probability' column since we renamed the lr.probabilityCol parameter previously.
model2.transform(test.toDF)
  .select("features", "label", "myProbability", "prediction")
  .collect()
  .foreach { case Row(features: Vector, label: Double, prob: Vector, prediction: Double) =>
    println(s"($features, $label) -> prob=$prob, prediction=$prediction")
  }

sc.stop()
{% endhighlight %}
</div>

<div data-lang="java">
{% highlight java %}
import java.util.List;
import com.google.common.collect.Lists;
import org.apache.spark.SparkConf;
import org.apache.spark.api.java.JavaSparkContext;
import org.apache.spark.ml.classification.LogisticRegressionModel;
import org.apache.spark.ml.param.ParamMap;
import org.apache.spark.ml.classification.LogisticRegression;
import org.apache.spark.mllib.linalg.Vectors;
import org.apache.spark.mllib.regression.LabeledPoint;
import org.apache.spark.sql.DataFrame;
import org.apache.spark.sql.SQLContext;
import org.apache.spark.sql.Row;

SparkConf conf = new SparkConf().setAppName("JavaSimpleParamsExample");
JavaSparkContext jsc = new JavaSparkContext(conf);
SQLContext jsql = new SQLContext(jsc);

// Prepare training data.
// We use LabeledPoint, which is a JavaBean.  Spark SQL can convert RDDs of JavaBeans
// into DataFrames, where it uses the bean metadata to infer the schema.
List<LabeledPoint> localTraining = Lists.newArrayList(
  new LabeledPoint(1.0, Vectors.dense(0.0, 1.1, 0.1)),
  new LabeledPoint(0.0, Vectors.dense(2.0, 1.0, -1.0)),
  new LabeledPoint(0.0, Vectors.dense(2.0, 1.3, 1.0)),
  new LabeledPoint(1.0, Vectors.dense(0.0, 1.2, -0.5)));
DataFrame training = jsql.createDataFrame(jsc.parallelize(localTraining), LabeledPoint.class);

// Create a LogisticRegression instance.  This instance is an Estimator.
LogisticRegression lr = new LogisticRegression();
// Print out the parameters, documentation, and any default values.
System.out.println("LogisticRegression parameters:\n" + lr.explainParams() + "\n");

// We may set parameters using setter methods.
lr.setMaxIter(10)
  .setRegParam(0.01);

// Learn a LogisticRegression model.  This uses the parameters stored in lr.
LogisticRegressionModel model1 = lr.fit(training);
// Since model1 is a Model (i.e., a Transformer produced by an Estimator),
// we can view the parameters it used during fit().
// This prints the parameter (name: value) pairs, where names are unique IDs for this
// LogisticRegression instance.
System.out.println("Model 1 was fit using parameters: " + model1.parent().extractParamMap());

// We may alternatively specify parameters using a ParamMap.
ParamMap paramMap = new ParamMap();
paramMap.put(lr.maxIter().w(20)); // Specify 1 Param.
paramMap.put(lr.maxIter(), 30); // This overwrites the original maxIter.
paramMap.put(lr.regParam().w(0.1), lr.threshold().w(0.55)); // Specify multiple Params.

// One can also combine ParamMaps.
ParamMap paramMap2 = new ParamMap();
paramMap2.put(lr.probabilityCol().w("myProbability")); // Change output column name
ParamMap paramMapCombined = paramMap.$plus$plus(paramMap2);

// Now learn a new model using the paramMapCombined parameters.
// paramMapCombined overrides all parameters set earlier via lr.set* methods.
LogisticRegressionModel model2 = lr.fit(training, paramMapCombined);
System.out.println("Model 2 was fit using parameters: " + model2.parent().extractParamMap());

// Prepare test documents.
List<LabeledPoint> localTest = Lists.newArrayList(
    new LabeledPoint(1.0, Vectors.dense(-1.0, 1.5, 1.3)),
    new LabeledPoint(0.0, Vectors.dense(3.0, 2.0, -0.1)),
    new LabeledPoint(1.0, Vectors.dense(0.0, 2.2, -1.5)));
DataFrame test = jsql.createDataFrame(jsc.parallelize(localTest), LabeledPoint.class);

// Make predictions on test documents using the Transformer.transform() method.
// LogisticRegression.transform will only use the 'features' column.
// Note that model2.transform() outputs a 'myProbability' column instead of the usual
// 'probability' column since we renamed the lr.probabilityCol parameter previously.
DataFrame results = model2.transform(test);
for (Row r: results.select("features", "label", "myProbability", "prediction").collect()) {
  System.out.println("(" + r.get(0) + ", " + r.get(1) + ") -> prob=" + r.get(2)
      + ", prediction=" + r.get(3));
}

jsc.stop();
{% endhighlight %}
</div>

</div>

## Example: Pipeline

This example follows the simple text document `Pipeline` illustrated in the figures above.

<div class="codetabs">

<div data-lang="scala">
{% highlight scala %}
import org.apache.spark.{SparkConf, SparkContext}
import org.apache.spark.ml.Pipeline
import org.apache.spark.ml.classification.LogisticRegression
import org.apache.spark.ml.feature.{HashingTF, Tokenizer}
import org.apache.spark.mllib.linalg.Vector
import org.apache.spark.sql.{Row, SQLContext}

// Labeled and unlabeled instance types.
// Spark SQL can infer schema from case classes.
case class LabeledDocument(id: Long, text: String, label: Double)
case class Document(id: Long, text: String)

// Set up contexts.  Import implicit conversions to DataFrame from sqlContext.
val conf = new SparkConf().setAppName("SimpleTextClassificationPipeline")
val sc = new SparkContext(conf)
val sqlContext = new SQLContext(sc)
import sqlContext.implicits._

// Prepare training documents, which are labeled.
val training = sc.parallelize(Seq(
  LabeledDocument(0L, "a b c d e spark", 1.0),
  LabeledDocument(1L, "b d", 0.0),
  LabeledDocument(2L, "spark f g h", 1.0),
  LabeledDocument(3L, "hadoop mapreduce", 0.0)))

// Configure an ML pipeline, which consists of three stages: tokenizer, hashingTF, and lr.
val tokenizer = new Tokenizer()
  .setInputCol("text")
  .setOutputCol("words")
val hashingTF = new HashingTF()
  .setNumFeatures(1000)
  .setInputCol(tokenizer.getOutputCol)
  .setOutputCol("features")
val lr = new LogisticRegression()
  .setMaxIter(10)
  .setRegParam(0.01)
val pipeline = new Pipeline()
  .setStages(Array(tokenizer, hashingTF, lr))

// Fit the pipeline to training documents.
val model = pipeline.fit(training.toDF)

// Prepare test documents, which are unlabeled.
val test = sc.parallelize(Seq(
  Document(4L, "spark i j k"),
  Document(5L, "l m n"),
  Document(6L, "mapreduce spark"),
  Document(7L, "apache hadoop")))

// Make predictions on test documents.
model.transform(test.toDF)
  .select("id", "text", "probability", "prediction")
  .collect()
  .foreach { case Row(id: Long, text: String, prob: Vector, prediction: Double) =>
    println(s"($id, $text) --> prob=$prob, prediction=$prediction")
  }

sc.stop()
{% endhighlight %}
</div>

<div data-lang="java">
{% highlight java %}
import java.util.List;
import com.google.common.collect.Lists;
import org.apache.spark.SparkConf;
import org.apache.spark.api.java.JavaSparkContext;
import org.apache.spark.ml.Pipeline;
import org.apache.spark.ml.PipelineModel;
import org.apache.spark.ml.PipelineStage;
import org.apache.spark.ml.classification.LogisticRegression;
import org.apache.spark.ml.feature.HashingTF;
import org.apache.spark.ml.feature.Tokenizer;
import org.apache.spark.sql.DataFrame;
import org.apache.spark.sql.Row;
import org.apache.spark.sql.SQLContext;

// Labeled and unlabeled instance types.
// Spark SQL can infer schema from Java Beans.
public class Document implements Serializable {
  private long id;
  private String text;

  public Document(long id, String text) {
    this.id = id;
    this.text = text;
  }

  public long getId() { return this.id; }
  public void setId(long id) { this.id = id; }

  public String getText() { return this.text; }
  public void setText(String text) { this.text = text; }
}

public class LabeledDocument extends Document implements Serializable {
  private double label;

  public LabeledDocument(long id, String text, double label) {
    super(id, text);
    this.label = label;
  }

  public double getLabel() { return this.label; }
  public void setLabel(double label) { this.label = label; }
}

// Set up contexts.
SparkConf conf = new SparkConf().setAppName("JavaSimpleTextClassificationPipeline");
JavaSparkContext jsc = new JavaSparkContext(conf);
SQLContext jsql = new SQLContext(jsc);

// Prepare training documents, which are labeled.
List<LabeledDocument> localTraining = Lists.newArrayList(
  new LabeledDocument(0L, "a b c d e spark", 1.0),
  new LabeledDocument(1L, "b d", 0.0),
  new LabeledDocument(2L, "spark f g h", 1.0),
  new LabeledDocument(3L, "hadoop mapreduce", 0.0));
DataFrame training = jsql.createDataFrame(jsc.parallelize(localTraining), LabeledDocument.class);

// Configure an ML pipeline, which consists of three stages: tokenizer, hashingTF, and lr.
Tokenizer tokenizer = new Tokenizer()
  .setInputCol("text")
  .setOutputCol("words");
HashingTF hashingTF = new HashingTF()
  .setNumFeatures(1000)
  .setInputCol(tokenizer.getOutputCol())
  .setOutputCol("features");
LogisticRegression lr = new LogisticRegression()
  .setMaxIter(10)
  .setRegParam(0.01);
Pipeline pipeline = new Pipeline()
  .setStages(new PipelineStage[] {tokenizer, hashingTF, lr});

// Fit the pipeline to training documents.
PipelineModel model = pipeline.fit(training);

// Prepare test documents, which are unlabeled.
List<Document> localTest = Lists.newArrayList(
  new Document(4L, "spark i j k"),
  new Document(5L, "l m n"),
  new Document(6L, "mapreduce spark"),
  new Document(7L, "apache hadoop"));
DataFrame test = jsql.createDataFrame(jsc.parallelize(localTest), Document.class);

// Make predictions on test documents.
DataFrame predictions = model.transform(test);
for (Row r: predictions.select("id", "text", "probability", "prediction").collect()) {
  System.out.println("(" + r.get(0) + ", " + r.get(1) + ") --> prob=" + r.get(2)
      + ", prediction=" + r.get(3));
}

jsc.stop();
{% endhighlight %}
</div>

<div data-lang="python">
{% highlight python %}
from pyspark import SparkContext
from pyspark.ml import Pipeline
from pyspark.ml.classification import LogisticRegression
from pyspark.ml.feature import HashingTF, Tokenizer
from pyspark.sql import Row, SQLContext

sc = SparkContext(appName="SimpleTextClassificationPipeline")
sqlContext = SQLContext(sc)

# Prepare training documents, which are labeled.
LabeledDocument = Row("id", "text", "label")
training = sc.parallelize([(0L, "a b c d e spark", 1.0),
                           (1L, "b d", 0.0),
                           (2L, "spark f g h", 1.0),
                           (3L, "hadoop mapreduce", 0.0)]) \
    .map(lambda x: LabeledDocument(*x)).toDF()

# Configure an ML pipeline, which consists of tree stages: tokenizer, hashingTF, and lr.
tokenizer = Tokenizer(inputCol="text", outputCol="words")
hashingTF = HashingTF(inputCol=tokenizer.getOutputCol(), outputCol="features")
lr = LogisticRegression(maxIter=10, regParam=0.01)
pipeline = Pipeline(stages=[tokenizer, hashingTF, lr])

# Fit the pipeline to training documents.
model = pipeline.fit(training)

# Prepare test documents, which are unlabeled.
Document = Row("id", "text")
test = sc.parallelize([(4L, "spark i j k"),
                       (5L, "l m n"),
                       (6L, "mapreduce spark"),
                       (7L, "apache hadoop")]) \
    .map(lambda x: Document(*x)).toDF()

# Make predictions on test documents and print columns of interest.
prediction = model.transform(test)
selected = prediction.select("id", "text", "prediction")
for row in selected.collect():
    print row

sc.stop()
{% endhighlight %}
</div>

</div>

## Example: Model Selection via Cross-Validation

An important task in ML is *model selection*, or using data to find the best model or parameters for a given task.  This is also called *tuning*.
`Pipeline`s facilitate model selection by making it easy to tune an entire `Pipeline` at once, rather than tuning each element in the `Pipeline` separately.

Currently, `spark.ml` supports model selection using the [`CrossValidator`](api/scala/index.html#org.apache.spark.ml.tuning.CrossValidator) class, which takes an `Estimator`, a set of `ParamMap`s, and an [`Evaluator`](api/scala/index.html#org.apache.spark.ml.Evaluator).
`CrossValidator` begins by splitting the dataset into a set of *folds* which are used as separate training and test datasets; e.g., with `$k=3$` folds, `CrossValidator` will generate 3 (training, test) dataset pairs, each of which uses 2/3 of the data for training and 1/3 for testing.
`CrossValidator` iterates through the set of `ParamMap`s. For each `ParamMap`, it trains the given `Estimator` and evaluates it using the given `Evaluator`.
The `ParamMap` which produces the best evaluation metric (averaged over the `$k$` folds) is selected as the best model.
`CrossValidator` finally fits the `Estimator` using the best `ParamMap` and the entire dataset.

The following example demonstrates using `CrossValidator` to select from a grid of parameters.
To help construct the parameter grid, we use the [`ParamGridBuilder`](api/scala/index.html#org.apache.spark.ml.tuning.ParamGridBuilder) utility.

Note that cross-validation over a grid of parameters is expensive.
E.g., in the example below, the parameter grid has 3 values for `hashingTF.numFeatures` and 2 values for `lr.regParam`, and `CrossValidator` uses 2 folds.  This multiplies out to `$(3 \times 2) \times 2 = 12$` different models being trained.
In realistic settings, it can be common to try many more parameters and use more folds (`$k=3$` and `$k=10$` are common).
In other words, using `CrossValidator` can be very expensive.
However, it is also a well-established method for choosing parameters which is more statistically sound than heuristic hand-tuning.

<div class="codetabs">

<div data-lang="scala">
{% highlight scala %}
import org.apache.spark.{SparkConf, SparkContext}
import org.apache.spark.ml.Pipeline
import org.apache.spark.ml.classification.LogisticRegression
import org.apache.spark.ml.evaluation.BinaryClassificationEvaluator
import org.apache.spark.ml.feature.{HashingTF, Tokenizer}
import org.apache.spark.ml.tuning.{ParamGridBuilder, CrossValidator}
import org.apache.spark.mllib.linalg.Vector
import org.apache.spark.sql.{Row, SQLContext}

// Labeled and unlabeled instance types.
// Spark SQL can infer schema from case classes.
case class LabeledDocument(id: Long, text: String, label: Double)
case class Document(id: Long, text: String)

val conf = new SparkConf().setAppName("CrossValidatorExample")
val sc = new SparkContext(conf)
val sqlContext = new SQLContext(sc)
import sqlContext.implicits._

// Prepare training documents, which are labeled.
val training = sc.parallelize(Seq(
  LabeledDocument(0L, "a b c d e spark", 1.0),
  LabeledDocument(1L, "b d", 0.0),
  LabeledDocument(2L, "spark f g h", 1.0),
  LabeledDocument(3L, "hadoop mapreduce", 0.0),
  LabeledDocument(4L, "b spark who", 1.0),
  LabeledDocument(5L, "g d a y", 0.0),
  LabeledDocument(6L, "spark fly", 1.0),
  LabeledDocument(7L, "was mapreduce", 0.0),
  LabeledDocument(8L, "e spark program", 1.0),
  LabeledDocument(9L, "a e c l", 0.0),
  LabeledDocument(10L, "spark compile", 1.0),
  LabeledDocument(11L, "hadoop software", 0.0)))

// Configure an ML pipeline, which consists of three stages: tokenizer, hashingTF, and lr.
val tokenizer = new Tokenizer()
  .setInputCol("text")
  .setOutputCol("words")
val hashingTF = new HashingTF()
  .setInputCol(tokenizer.getOutputCol)
  .setOutputCol("features")
val lr = new LogisticRegression()
  .setMaxIter(10)
val pipeline = new Pipeline()
  .setStages(Array(tokenizer, hashingTF, lr))

// We now treat the Pipeline as an Estimator, wrapping it in a CrossValidator instance.
// This will allow us to jointly choose parameters for all Pipeline stages.
// A CrossValidator requires an Estimator, a set of Estimator ParamMaps, and an Evaluator.
val crossval = new CrossValidator()
  .setEstimator(pipeline)
  .setEvaluator(new BinaryClassificationEvaluator)
// We use a ParamGridBuilder to construct a grid of parameters to search over.
// With 3 values for hashingTF.numFeatures and 2 values for lr.regParam,
// this grid will have 3 x 2 = 6 parameter settings for CrossValidator to choose from.
val paramGrid = new ParamGridBuilder()
  .addGrid(hashingTF.numFeatures, Array(10, 100, 1000))
  .addGrid(lr.regParam, Array(0.1, 0.01))
  .build()
crossval.setEstimatorParamMaps(paramGrid)
crossval.setNumFolds(2) // Use 3+ in practice

// Run cross-validation, and choose the best set of parameters.
val cvModel = crossval.fit(training.toDF)

// Prepare test documents, which are unlabeled.
val test = sc.parallelize(Seq(
  Document(4L, "spark i j k"),
  Document(5L, "l m n"),
  Document(6L, "mapreduce spark"),
  Document(7L, "apache hadoop")))

// Make predictions on test documents. cvModel uses the best model found (lrModel).
cvModel.transform(test.toDF)
  .select("id", "text", "probability", "prediction")
  .collect()
  .foreach { case Row(id: Long, text: String, prob: Vector, prediction: Double) =>
  println(s"($id, $text) --> prob=$prob, prediction=$prediction")
}

sc.stop()
{% endhighlight %}
</div>

<div data-lang="java">
{% highlight java %}
import java.util.List;
import com.google.common.collect.Lists;
import org.apache.spark.SparkConf;
import org.apache.spark.api.java.JavaSparkContext;
import org.apache.spark.ml.Pipeline;
import org.apache.spark.ml.PipelineStage;
import org.apache.spark.ml.classification.LogisticRegression;
import org.apache.spark.ml.evaluation.BinaryClassificationEvaluator;
import org.apache.spark.ml.feature.HashingTF;
import org.apache.spark.ml.feature.Tokenizer;
import org.apache.spark.ml.param.ParamMap;
import org.apache.spark.ml.tuning.CrossValidator;
import org.apache.spark.ml.tuning.CrossValidatorModel;
import org.apache.spark.ml.tuning.ParamGridBuilder;
import org.apache.spark.sql.DataFrame;
import org.apache.spark.sql.Row;
import org.apache.spark.sql.SQLContext;

// Labeled and unlabeled instance types.
// Spark SQL can infer schema from Java Beans.
public class Document implements Serializable {
  private long id;
  private String text;

  public Document(long id, String text) {
    this.id = id;
    this.text = text;
  }

  public long getId() { return this.id; }
  public void setId(long id) { this.id = id; }

  public String getText() { return this.text; }
  public void setText(String text) { this.text = text; }
}

public class LabeledDocument extends Document implements Serializable {
  private double label;

  public LabeledDocument(long id, String text, double label) {
    super(id, text);
    this.label = label;
  }

  public double getLabel() { return this.label; }
  public void setLabel(double label) { this.label = label; }
}

SparkConf conf = new SparkConf().setAppName("JavaCrossValidatorExample");
JavaSparkContext jsc = new JavaSparkContext(conf);
SQLContext jsql = new SQLContext(jsc);

// Prepare training documents, which are labeled.
List<LabeledDocument> localTraining = Lists.newArrayList(
  new LabeledDocument(0L, "a b c d e spark", 1.0),
  new LabeledDocument(1L, "b d", 0.0),
  new LabeledDocument(2L, "spark f g h", 1.0),
  new LabeledDocument(3L, "hadoop mapreduce", 0.0),
  new LabeledDocument(4L, "b spark who", 1.0),
  new LabeledDocument(5L, "g d a y", 0.0),
  new LabeledDocument(6L, "spark fly", 1.0),
  new LabeledDocument(7L, "was mapreduce", 0.0),
  new LabeledDocument(8L, "e spark program", 1.0),
  new LabeledDocument(9L, "a e c l", 0.0),
  new LabeledDocument(10L, "spark compile", 1.0),
  new LabeledDocument(11L, "hadoop software", 0.0));
DataFrame training = jsql.createDataFrame(jsc.parallelize(localTraining), LabeledDocument.class);

// Configure an ML pipeline, which consists of three stages: tokenizer, hashingTF, and lr.
Tokenizer tokenizer = new Tokenizer()
  .setInputCol("text")
  .setOutputCol("words");
HashingTF hashingTF = new HashingTF()
  .setNumFeatures(1000)
  .setInputCol(tokenizer.getOutputCol())
  .setOutputCol("features");
LogisticRegression lr = new LogisticRegression()
  .setMaxIter(10)
  .setRegParam(0.01);
Pipeline pipeline = new Pipeline()
  .setStages(new PipelineStage[] {tokenizer, hashingTF, lr});

// We now treat the Pipeline as an Estimator, wrapping it in a CrossValidator instance.
// This will allow us to jointly choose parameters for all Pipeline stages.
// A CrossValidator requires an Estimator, a set of Estimator ParamMaps, and an Evaluator.
CrossValidator crossval = new CrossValidator()
    .setEstimator(pipeline)
    .setEvaluator(new BinaryClassificationEvaluator());
// We use a ParamGridBuilder to construct a grid of parameters to search over.
// With 3 values for hashingTF.numFeatures and 2 values for lr.regParam,
// this grid will have 3 x 2 = 6 parameter settings for CrossValidator to choose from.
ParamMap[] paramGrid = new ParamGridBuilder()
    .addGrid(hashingTF.numFeatures(), new int[]{10, 100, 1000})
    .addGrid(lr.regParam(), new double[]{0.1, 0.01})
    .build();
crossval.setEstimatorParamMaps(paramGrid);
crossval.setNumFolds(2); // Use 3+ in practice

// Run cross-validation, and choose the best set of parameters.
CrossValidatorModel cvModel = crossval.fit(training);

// Prepare test documents, which are unlabeled.
List<Document> localTest = Lists.newArrayList(
  new Document(4L, "spark i j k"),
  new Document(5L, "l m n"),
  new Document(6L, "mapreduce spark"),
  new Document(7L, "apache hadoop"));
DataFrame test = jsql.createDataFrame(jsc.parallelize(localTest), Document.class);

// Make predictions on test documents. cvModel uses the best model found (lrModel).
DataFrame predictions = cvModel.transform(test);
for (Row r: predictions.select("id", "text", "probability", "prediction").collect()) {
  System.out.println("(" + r.get(0) + ", " + r.get(1) + ") --> prob=" + r.get(2)
      + ", prediction=" + r.get(3));
}

jsc.stop();
{% endhighlight %}
</div>

</div>

# Dependencies

Spark ML currently depends on MLlib and has the same dependencies.
Please see the [MLlib Dependencies guide](mllib-guide.html#dependencies) for more info.

Spark ML also depends upon Spark SQL, but the relevant parts of Spark SQL do not bring additional dependencies.

# Migration Guide

## From 1.3 to 1.4

Several major API changes occurred, including:
* `Param` and other APIs for specifying parameters
* `uid` unique IDs for Pipeline components
* Reorganization of certain classes
Since the `spark.ml` API was an Alpha Component in Spark 1.3, we do not list all changes here.

However, now that `spark.ml` is no longer an Alpha Component, we will provide details on any API changes for future releases.

## From 1.2 to 1.3

The main API changes are from Spark SQL.  We list the most important changes here:

* The old [SchemaRDD](http://spark.apache.org/docs/1.2.1/api/scala/index.html#org.apache.spark.sql.SchemaRDD) has been replaced with [DataFrame](api/scala/index.html#org.apache.spark.sql.DataFrame) with a somewhat modified API.  All algorithms in Spark ML which used to use SchemaRDD now use DataFrame.
* In Spark 1.2, we used implicit conversions from `RDD`s of `LabeledPoint` into `SchemaRDD`s by calling `import sqlContext._` where `sqlContext` was an instance of `SQLContext`.  These implicits have been moved, so we now call `import sqlContext.implicits._`.
* Java APIs for SQL have also changed accordingly.  Please see the examples above and the [Spark SQL Programming Guide](sql-programming-guide.html) for details.

Other changes were in `LogisticRegression`:

* The `scoreCol` output column (with default value "score") was renamed to be `probabilityCol` (with default value "probability").  The type was originally `Double` (for the probability of class 1.0), but it is now `Vector` (for the probability of each class, to support multiclass classification in the future).
* In Spark 1.2, `LogisticRegressionModel` did not include an intercept.  In Spark 1.3, it includes an intercept; however, it will always be 0.0 since it uses the default settings for [spark.mllib.LogisticRegressionWithLBFGS](api/scala/index.html#org.apache.spark.mllib.classification.LogisticRegressionWithLBFGS).  The option to use an intercept will be added in the future.